RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 LARP4BQ92615 738 aaKnown RBP17.32■□□□□ 0.36
COL18A1-203ENST00000359759 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 IL13P35225 146 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 ATP6V1E1P36543 226 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 DNAJC10Q8IXB1 793 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 P2RX5Q93086 422 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 TTI1O43156 1089 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 PDE6AP16499 860 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 DR1Q01658 176 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 RGS9BPQ6ZS82 235 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 ZNF577Q9BSK1 485 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 JRKLQ9Y4A0 524 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 CSADQ9Y600 493 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 EIF4A3P38919 411 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 GLE1Q53GS7 698 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 NUDCD1Q96RS6 583 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 SERPINI1Q99574 410 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 TRPV6Q9H1D0 765 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 CDO1Q16878 200 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 NXF1Q9UBU9 619 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 AOC3Q16853 763 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 SAMSN1Q9NSI8 373 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 NFU1Q9UMS0 254 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 UBN2Q6ZU65 1347 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 CNOT10Q9H9A5 744 aaKnown RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 MAPK13O15264 365 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 BNIP3LO60238 219 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 SPAG7O75391 227 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 PDE6BP35913 854 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 TTC17Q96AE7 1141 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-203ENST00000359759 TEKT2Q9UIF3 430 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 PLAAQ9Y263 795 aa17.31■□□□□ 0.36
COL18A1-203ENST00000359759 DDAH1O94760 285 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 ICA1Q05084 483 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 FAM160B1Q5W0V3 765 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 NUGGCQ68CJ6 796 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 DNAJC24Q6P3W2 148 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 NRBP2Q9NSY0 501 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 H0YCG3 227 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 M0R2C6 588 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 PTPREP23469 700 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 FLOT2Q14254 428 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 KIAA0825Q8IV33 1275 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
COL18A1-203ENST00000359759 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 CASP8Q14790 479 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 OR6B2Q6IFH4 312 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 WARS2Q9UGM6 360 aaKnown RBP17.3■□□□□ 0.36
COL18A1-203ENST00000359759 DNAJC6O75061 913 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 BPIFB4P59827 614 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
COL18A1-203ENST00000359759 MCF2L2Q86YR7 1114 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 BBS5Q8N3I7 341 aa17.3■□□□□ 0.36
COL18A1-203ENST00000359759 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 DDIT3P35638 169 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 ADCK5Q3MIX3 580 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 TUBB6Q9BUF5 446 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 SLC13A4Q9UKG4 626 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 HSPA4LO95757 839 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 ARL4AP40617 200 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 FMO2Q99518 471 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 TRIM15Q9C019 465 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 GTPBP10A4D1E9 387 aaKnown RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 SYCE1LA8MT33 242 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 CAPRIN1Q14444 709 aaKnown RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 SLFN13Q68D06 897 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 STRIP2Q9ULQ0 834 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 TYW5A2RUC4 315 aaKnown RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 CDC25AP30304 524 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 BLVRAP53004 296 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 HNRNPH2P55795 449 aaKnown RBP17.29■□□□□ 0.36
COL18A1-203ENST00000359759 PYROXD1Q8WU10 500 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 PBKQ96KB5 322 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
COL18A1-203ENST00000359759 CA4P22748 312 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 SLC16A2P36021 539 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 GSPT2Q8IYD1 628 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 ENOX1Q8TC92 643 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 TRIM11Q96F44 468 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 ACCSQ96QU6 501 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 HLA-DPA1P20036 260 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 RFX8Q6ZV50 586 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 ASXL2Q76L83 1435 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms