RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 USP17L22D6RA61 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L17D6RBQ6 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L19D6RCP7 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L20D6RJB6 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 CHRNDQ07001 517 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L24Q0WX57 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 SPDYE2Q495Y8 402 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 NFRKBQ6P4R8 1299 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 KCNH4Q9UQ05 1017 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 ZNF407Q9C0G0 2248 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 HEATR5BQ9P2D3 2071 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 MYO1BO43795 1136 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 SMC2O95347 1197 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 HSP90B1P14625 803 aaKnown RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 NOGQ13253 232 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 PHLDB2Q86SQ0 1253 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 CRACR2BQ8N4Y2 399 aaPredicted RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 ERVK-5Q9HDB9 667 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 FBXO28Q9NVF7 368 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 ZNF219Q9P2Y4 722 aaPredicted RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 SPDYE2BA6NHP3 402 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 SPDYE6P0CI01 402 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 INHBEP58166 350 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 RPS8P62241 208 aaKnown RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 MTMR2Q13614 643 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 KRT31Q15323 416 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 UAP1Q16222 522 aaPredicted RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 C10orf67Q8IYJ2 551 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 SPOCK2Q92563 424 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 CRISPLD2Q9H0B8 497 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 OSBPL5Q9H0X9 879 aaPredicted RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 C10orf88Q9H8K7 445 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 CARSP49589 748 aaKnown RBP6.38□□□□□ -1.39
CD47-201ENST00000355354 MCM2P49736 904 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 UBE2SQ16763 222 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 INF2Q27J81 1249 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 ARMC3Q5W041 872 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 ANKRD40Q6AI12 368 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 LPIN2Q92539 896 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP6NLQ92738 828 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 PPP2R2CQ9Y2T4 447 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 EDN1P05305 212 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 PTPREP23469 700 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 FKBP1CQ5VVH2 108 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 LRRC1Q9BTT6 524 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 KCNH3Q9ULD8 1083 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 SNCAIPQ9Y6H5 919 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 MXRA5Q9NR99 2828 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 MYO3BQ8WXR4 1341 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 NOVP48745 357 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 FGD1P98174 961 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 TNIP1Q15025 636 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 TPD52L1Q16890 204 aaPredicted RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 HAS1Q92839 578 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 COA1Q9GZY4 146 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 A0A087X0T9 212 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 NPM3O75607 178 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 SHBGP04278 402 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 FAM228BP0C875 321 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 MECOMQ03112 1051 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 CDKAL1Q5VV42 579 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 HGSNATQ68CP4 663 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 APOBEC3HQ6NTF7 200 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 IFNL1Q8IU54 200 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 PHC3Q8NDX5 983 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 UHMK1Q8TAS1 419 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 PRR11Q96HE9 360 aaPredicted RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 CELF4Q9BZC1 486 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 OSGEPQ9NPF4 335 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 DCP1AQ9NPI6 582 aaPredicted RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 ZBTB21Q9ULJ3 1066 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 PCDHGB4Q9UN71 923 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 PCDHGB5Q9Y5G0 923 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 SPTBN1Q01082 2364 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 MEIS1O00470 390 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 PPIP5K2O43314 1243 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 CSDE1O75534 798 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 CYP2C19P33261 490 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 YBX1P67809 324 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 MOB2Q70IA6 237 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 HOMER1Q86YM7 354 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 ZNF296Q8WUU4 475 aaPredicted RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 C8orf76Q96K31 380 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 TRMT112Q9UI30 125 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 LEMD3Q9Y2U8 911 aa6.37□□□□□ -1.39
CD47-201ENST00000355354 DIDO1Q9BTC0 2240 aaKnown RBP6.37□□□□□ -1.39
CD47-201ENST00000355354 RNF113AO15541 343 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 TMOD1P28289 359 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 MCM7P33993 719 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 TERF1P54274 439 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 DPP8Q6V1X1 898 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 PIK3AP1Q6ZUJ8 805 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 MLXIPLQ9NP71 852 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 CNTNAP5Q8WYK1 1306 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 CELF2O95319 508 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 GH1P01241 217 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms