RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 IKBKEQ14164 716 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 HIC1Q14526 733 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 FAM117BQ6P1L5 589 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 SYNE3Q6ZMZ3 975 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 NLRX1Q86UT6 975 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 SKAP1Q86WV1 359 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 ATXN2LQ8WWM7 1075 aaKnown RBP22.38■■□□□ 1.17
ITGA4-202ENST00000339307 INPP4AQ96PE3 977 aaPredicted RBP22.38■■□□□ 1.17
ITGA4-202ENST00000339307 PSTPIP2Q9H939 334 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 SMIM10L2AP0DMW4 78 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 SMIM10L2BP0DMW5 78 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 ICAM3P32942 547 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 DEFB103AP81534 67 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 RBL2Q08999 1139 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 COL9A3Q14050 684 aaPredicted RBP22.37■■□□□ 1.17
ITGA4-202ENST00000339307 METTL7BQ6UX53 244 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 USP26Q9BXU7 913 aa22.37■■□□□ 1.17
ITGA4-202ENST00000339307 ABHD14A-ACY1A0A1B0GW23 586 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 RSPH10B2B2RC85 870 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 MEIS2O14770 477 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 CXCL10P02778 98 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 RSPH10BP0C881 870 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 LIFRP42702 1097 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 MRPS5P82675 430 aaKnown RBP22.36■■□□□ 1.17
ITGA4-202ENST00000339307 FRMPD4Q14CM0 1322 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 NECTIN1Q15223 517 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 PCNX4Q63HM2 1172 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 MICU3Q86XE3 530 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 ASB2Q96Q27 587 aa22.36■■□□□ 1.17
ITGA4-202ENST00000339307 EPOPA6NHQ4 379 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 TREHO43280 583 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 ARHGEF15O94989 841 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 SEMA3FQ13275 785 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 TCTN1Q2MV58 587 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 TRIM71Q2Q1W2 868 aaKnown RBP22.35■■□□□ 1.17
ITGA4-202ENST00000339307 HEATR3Q7Z4Q2 680 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 GPR20Q99678 358 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 RNPEPQ9H4A4 650 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 ZNF215Q9UL58 517 aaPredicted RBP22.35■■□□□ 1.17
ITGA4-202ENST00000339307 MTUS1Q9ULD2 1270 aa22.35■■□□□ 1.17
ITGA4-202ENST00000339307 EMSYQ7Z589 1322 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 PIK3CDO00329 1044 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 LGR5O75473 907 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 CTSHP09668 335 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 UBE2SQ16763 222 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 KRT40Q6A162 431 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 XRRA1Q6P2D8 792 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 SERINC5Q86VE9 423 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 TRIM50Q86XT4 487 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 FANCBQ8NB91 859 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 SETD4Q9NVD3 440 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 PKD2L1Q9P0L9 805 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 CHD9Q3L8U1 2897 aa22.34■■□□□ 1.17
ITGA4-202ENST00000339307 LCHNA4D1U4 455 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 SPDYE3A6NKU9 549 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 EFCAB14O75071 495 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 GNAT1P11488 350 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 MBTPS1Q14703 1052 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 TELO2Q9Y4R8 837 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 MTCH2Q9Y6C9 303 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 DOCK5Q9H7D0 1870 aa22.33■■□□□ 1.17
ITGA4-202ENST00000339307 VCANP13611 3396 aa22.33■■□□□ 1.16
ITGA4-202ENST00000339307 ARHGAP4P98171 946 aa22.32■■□□□ 1.16
ITGA4-202ENST00000339307 TRAF7Q6Q0C0 670 aa22.32■■□□□ 1.16
ITGA4-202ENST00000339307 SPRED2Q7Z698 418 aa22.32■■□□□ 1.16
ITGA4-202ENST00000339307 GIMAP8Q8ND71 665 aaPredicted RBP22.32■■□□□ 1.16
ITGA4-202ENST00000339307 DBF4BQ8NFT6 615 aa22.32■■□□□ 1.16
ITGA4-202ENST00000339307 NEK1Q96PY6 1258 aa22.32■■□□□ 1.16
ITGA4-202ENST00000339307 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.31■■□□□ 1.16
ITGA4-202ENST00000339307 TMTC3Q6ZXV5 915 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 CENPQQ7L2Z9 268 aaPredicted RBP22.31■■□□□ 1.16
ITGA4-202ENST00000339307 MYOCDQ8IZQ8 938 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 TCEANC2Q96MN5 208 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 RAD9AQ99638 391 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 SENP7Q9BQF6 1050 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 NAP1L2Q9ULW6 460 aaPredicted RBP22.31■■□□□ 1.16
ITGA4-202ENST00000339307 TNFRSF10AO00220 468 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 GJB5O95377 273 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 AMHP03971 560 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 TCF7P36402 384 aaPredicted RBP22.31■■□□□ 1.16
ITGA4-202ENST00000339307 GRB10Q13322 594 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 ADAMTS19Q8TE59 1207 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 CDHR1Q96JP9 859 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 PCDHA6Q9UN73 950 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 PCDHA8Q9Y5H6 950 aa22.31■■□□□ 1.16
ITGA4-202ENST00000339307 ATP9AO75110 1047 aa22.3■■□□□ 1.16
ITGA4-202ENST00000339307 TFF2Q03403 129 aa22.3■■□□□ 1.16
ITGA4-202ENST00000339307 GPRASP2Q96D09 838 aa22.3■■□□□ 1.16
ITGA4-202ENST00000339307 EHMT1Q9H9B1 1298 aa22.3■■□□□ 1.16
ITGA4-202ENST00000339307 PTPRSQ13332 1948 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 MARK3P27448 753 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 MTMR1Q13613 665 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 GDPD5Q8WTR4 605 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 SEPT8Q92599 483 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 GLG1Q92896 1179 aa22.29■■□□□ 1.16
ITGA4-202ENST00000339307 RBM28Q9NW13 759 aaKnown RBP22.29■■□□□ 1.16
ITGA4-202ENST00000339307 ITGB5P18084 799 aa22.28■■□□□ 1.16
ITGA4-202ENST00000339307 NAPAP54920 295 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms