RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TDP2O95551 362 aa20.76■□□□□ 0.91
PSPC1-201ENST00000338910 PLCG1P19174 1290 aa20.76■□□□□ 0.91
PSPC1-201ENST00000338910 SND1Q7KZF4 910 aaKnown RBP eCLIP20.76■□□□□ 0.91
PSPC1-201ENST00000338910 MMGT1Q8N4V1 131 aa20.76■□□□□ 0.91
PSPC1-201ENST00000338910 RMND1Q9NWS8 449 aa20.76■□□□□ 0.91
PSPC1-201ENST00000338910 ZNRF3Q9ULT6 936 aa20.76■□□□□ 0.91
PSPC1-201ENST00000338910 EDIL3O43854 480 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 INPP5BP32019 993 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 DLGAP5Q15398 846 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 TSR1Q2NL82 804 aaKnown RBP20.75■□□□□ 0.91
PSPC1-201ENST00000338910 SLFN13Q68D06 897 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 AK8Q96MA6 479 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 RIC8AQ9NPQ8 531 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 SLC37A4O43826 429 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 POLD1P28340 1107 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 PRCPP42785 496 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 NIM1KQ8IY84 436 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 RUBCNQ92622 972 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 MKL1Q969V6 931 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 RABEP2Q9H5N1 569 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 KBTBD4Q9NVX7 518 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 NYAP2Q9P242 653 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 HDAC9Q9UKV0 1011 aa20.75■□□□□ 0.91
PSPC1-201ENST00000338910 ATRNL1Q5VV63 1379 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 EPB41P11171 864 aaKnown RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 IDEP14735 1019 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CYLC1P35663 651 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 SKOR1P84550 965 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 ICA1Q05084 483 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CALCRLQ16602 461 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CCDC70Q6NSX1 233 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CREG2Q8IUH2 290 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CNPY4Q8N129 248 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 GPATCH11Q8N954 259 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 PSTPIP2Q9H939 334 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 ATXN2Q99700 1313 aaKnown RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 JAG1P78504 1218 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 ABCB5Q2M3G0 1257 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 DALRD3Q5D0E6 543 aaKnown RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 ZNF572Q7Z3I7 529 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 CCDC125Q86Z20 511 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 JADE2Q9NQC1 790 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 TMOD2Q9NZR1 351 aa20.74■□□□□ 0.91
PSPC1-201ENST00000338910 DMGDHQ9UI17 866 aaKnown RBP20.74■□□□□ 0.91
PSPC1-201ENST00000338910 USP8P40818 1118 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MNAT1P51948 309 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 ITIH3Q06033 890 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 HDAC7Q8WUI4 952 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 CUL5Q93034 780 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MTMR9Q96QG7 549 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 TTYH3Q9C0H2 523 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MTFR1LQ9H019 292 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 ZNF70Q9UC06 446 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-201ENST00000338910 DUSP10Q9Y6W6 482 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 TRIM49BA6NDI0 452 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 OPA1O60313 960 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 CHRM1P11229 460 aaPredicted RBP20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
PSPC1-201ENST00000338910 CXCL9Q07325 125 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 PRPF38AQ8NAV1 312 aaKnown RBP20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MTMR8Q96EF0 704 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 HINFPQ9BQA5 517 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 MMTAG2Q9BU76 263 aaKnown RBP20.73■□□□□ 0.91
PSPC1-201ENST00000338910 VPS33BQ9H267 617 aa20.73■□□□□ 0.91
PSPC1-201ENST00000338910 F5H6K3 240 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 EEF1GP26641 437 aaKnown RBP20.72■□□□□ 0.91
PSPC1-201ENST00000338910 SNAP25P60880 206 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 KLRC3Q07444 240 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 RRP1BQ14684 758 aaKnown RBP20.72■□□□□ 0.91
PSPC1-201ENST00000338910 CCDC170Q8IYT3 715 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 LRRC1Q9BTT6 524 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 SNX12Q9UMY4 172 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 KLRC4O43908 158 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 GH2P01242 217 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 PPP1R18Q6NYC8 613 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 ADSSL1Q8N142 457 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 NHEJ1Q9H9Q4 299 aaPredicted RBP20.72■□□□□ 0.91
PSPC1-201ENST00000338910 AGPAT5Q9NUQ2 364 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 SAMM50Q9Y512 469 aa20.72■□□□□ 0.91
PSPC1-201ENST00000338910 A6NNZ2 444 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L15C9J2P7 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L13C9JLJ4 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L11C9JVI0 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L18D6R9N7 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L22D6RA61 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L17D6RBQ6 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L19D6RCP7 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L20D6RJB6 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 CLK2P49760 499 aaKnown RBP20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L24Q0WX57 530 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 R3HDM1Q15032 1099 aaKnown RBP20.71■□□□□ 0.91
PSPC1-201ENST00000338910 TUBB8Q3ZCM7 444 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 TTMPQ5BVD1 217 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 USP17L6PQ6QN14 398 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 VEZTQ9HBM0 779 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 LRWD1Q9UFC0 647 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms