RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
VSTM1-201ENST00000338372 FANCBQ8NB91 859 aa19.67■□□□□ 0.74
VSTM1-201ENST00000338372 FTOQ9C0B1 505 aaKnown RBP eCLIP19.67■□□□□ 0.74
VSTM1-201ENST00000338372 RNPEPQ9H4A4 650 aa19.67■□□□□ 0.74
VSTM1-201ENST00000338372 SIP14410 1827 aa19.67■□□□□ 0.74
VSTM1-201ENST00000338372 XIRP2A4UGR9 3374 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 hCG_1642624A0A1W2PR95 340 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 H3BRB1 525 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 RFXAPO00287 272 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 ATP9AO75110 1047 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 PARNO95453 639 aaKnown RBP19.66■□□□□ 0.74
VSTM1-201ENST00000338372 ADCK5Q3MIX3 580 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 PPP2R2DQ66LE6 453 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 CYFIP1Q7L576 1253 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 TMCO2Q7Z6W1 182 aaPredicted RBP19.66■□□□□ 0.74
VSTM1-201ENST00000338372 SENP7Q9BQF6 1050 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 TUT1Q9H6E5 874 aaKnown RBP19.66■□□□□ 0.74
VSTM1-201ENST00000338372 MLXIPQ9HAP2 919 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 ANO2Q9NQ90 1003 aa19.66■□□□□ 0.74
VSTM1-201ENST00000338372 FIBPO43427 364 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 ITGB5P18084 799 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 DEFB103AP81534 67 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 NEDD9Q14511 834 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 XRRA1Q6P2D8 792 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 CNKSR3Q6P9H4 555 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 CENPQQ7L2Z9 268 aaPredicted RBP19.65■□□□□ 0.74
VSTM1-201ENST00000338372 FAM217BQ9NTX9 383 aaPredicted RBP19.65■□□□□ 0.74
VSTM1-201ENST00000338372 BRPF3Q9ULD4 1205 aa19.65■□□□□ 0.74
VSTM1-201ENST00000338372 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
VSTM1-201ENST00000338372 CCDC69A6NI79 296 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 TREHO43280 583 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 LPXNO60711 386 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 SMIM10L2AP0DMW4 78 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 SMIM10L2BP0DMW5 78 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 CALM1P0DP23 149 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 CALM2P0DP24 149 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 CALM3P0DP25 149 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 KCNA2P16389 499 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 GNPTABQ3T906 1256 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 TYW1BQ6NUM6 668 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 KCNB2Q92953 911 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 UBIAD1Q9Y5Z9 338 aa19.64■□□□□ 0.73
VSTM1-201ENST00000338372 CNTNAP5Q8WYK1 1306 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 LCHNA4D1U4 455 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 APOA5Q6Q788 366 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 NFXL1Q6ZNB6 911 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 TRIM50Q86XT4 487 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 USP26Q9BXU7 913 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 PSTPIP2Q9H939 334 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 MTCH2Q9Y6C9 303 aa19.63■□□□□ 0.73
VSTM1-201ENST00000338372 NCOR1O75376 2440 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 ABHD14A-ACY1A0A1B0GW23 586 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 GSTTP1A0A1W2PQM5 241 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 IGFBP4P22692 258 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 CCDC85BQ15834 202 aaPredicted RBP19.62■□□□□ 0.73
VSTM1-201ENST00000338372 UBE2SQ16763 222 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 CCDC82Q8N4S0 544 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 PPM1EQ8WY54 764 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 GPRASP2Q96D09 838 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 TCEANC2Q96MN5 208 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 NEK1Q96PY6 1258 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 CERS4Q9HA82 394 aa19.62■□□□□ 0.73
VSTM1-201ENST00000338372 C17orf102A2RUQ5 167 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 PLEKHG4Q58EX7 1191 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 TJAP1Q5JTD0 557 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 KRT40Q6A162 431 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
VSTM1-201ENST00000338372 CUL5Q93034 780 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 ATP6V0A1Q93050 837 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 SETD4Q9NVD3 440 aa19.61■□□□□ 0.73
VSTM1-201ENST00000338372 SEC63Q9UGP8 760 aaKnown RBP19.61■□□□□ 0.73
VSTM1-201ENST00000338372 TCF20Q9UGU0 1960 aaKnown RBP19.61■□□□□ 0.73
VSTM1-201ENST00000338372 LGR5O75473 907 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 GJB5O95377 273 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 WWC2Q6AWC2 1192 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.6■□□□□ 0.73
VSTM1-201ENST00000338372 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 DBF4BQ8NFT6 615 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 ATXN2LQ8WWM7 1075 aaKnown RBP19.6■□□□□ 0.73
VSTM1-201ENST00000338372 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 PCDHA8Q9Y5H6 950 aa19.6■□□□□ 0.73
VSTM1-201ENST00000338372 LOXHD1Q8IVV2 1947 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 RSPH10B2B2RC85 870 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 RSPH10BP0C881 870 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 CDC27P30260 824 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 THPOP40225 353 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 FAM26DQ5JW98 314 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 LMBR1Q8WVP7 490 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 ASB2Q96Q27 587 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 JADE2Q9NQC1 790 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 BRWD1Q9NSI6 2320 aa19.59■□□□□ 0.73
VSTM1-201ENST00000338372 NOP56O00567 594 aaKnown RBP19.58■□□□□ 0.72
VSTM1-201ENST00000338372 TLL1O43897 1013 aa19.58■□□□□ 0.72
VSTM1-201ENST00000338372 KCNJ6P48051 423 aa19.58■□□□□ 0.72
VSTM1-201ENST00000338372 IKBKEQ14164 716 aa19.58■□□□□ 0.72
VSTM1-201ENST00000338372 NLRX1Q86UT6 975 aa19.58■□□□□ 0.72
VSTM1-201ENST00000338372 CYP2W1Q8TAV3 490 aa19.58■□□□□ 0.72
VSTM1-201ENST00000338372 PCYT2Q99447 389 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms