RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 STX2P32856 288 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 TTLL11Q8NHH1 800 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 CHMP6Q96FZ7 201 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 SRPRBQ9Y5M8 271 aaKnown RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 REREQ9P2R6 1566 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 COG7P83436 770 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 NR1I3Q14994 352 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 ZC3H18Q86VM9 953 aaKnown RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 KIAA0825Q8IV33 1275 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 CNGA1P29973 690 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 ARL1P40616 181 aaPredicted RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 FAM178BQ8IXR5 827 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 P3H4Q92791 437 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 LBHD1Q9BQE6 289 aaPredicted RBP17.44■□□□□ 0.38
NPHP3-201ENST00000337331 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
NPHP3-201ENST00000337331 ATP6V1G2O95670 118 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 GAS8O95995 478 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 TMEM154Q6P9G4 183 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 A1CFQ9NQ94 594 aaKnown RBP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 ZFATQ9P243 1243 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 KIAA1024Q9UPX6 916 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 TTC26A0AVF1 554 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 SKIP12755 728 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 CARSP49589 748 aaKnown RBP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 VPS41P49754 854 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 SEPT2Q15019 361 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 P2RX5Q93086 422 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 STRBPQ96SI9 672 aaKnown RBP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 GINS2Q9Y248 185 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 CFAP73A6NFT4 308 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 DKC1O60832 514 aaKnown RBP eCLIP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 KRT15P19012 456 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 MCAMP43121 646 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 PDE1CQ14123 709 aaPredicted RBP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
NPHP3-201ENST00000337331 ECT2Q9H8V3 914 aa17.43■□□□□ 0.38
NPHP3-201ENST00000337331 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 TTC36A6NLP5 189 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 CYP27B1O15528 508 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 ADCY1Q08828 1119 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 LRRC41Q15345 812 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 PLCB1Q9NQ66 1216 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 RHBDL2Q9NX52 303 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 TUBE1Q9UJT0 475 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 PCDHA4Q9UN74 947 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 C21orf2O43822 256 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 DHTKD1Q96HY7 919 aaPredicted RBP17.42■□□□□ 0.38
NPHP3-201ENST00000337331 HNRNPCP07910 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
NPHP3-201ENST00000337331 TNNI1P19237 187 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 C15orf41Q9Y2V0 281 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 COL4A3BPQ9Y5P4 624 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 A0A1B0GTH6 734 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 ACCSLQ4AC99 568 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 GLE1Q53GS7 698 aaKnown RBP17.42■□□□□ 0.38
NPHP3-201ENST00000337331 RESP18Q5W5W9 173 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 PPP1R21Q6ZMI0 780 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 ZCWPW1Q9H0M4 648 aa17.42■□□□□ 0.38
NPHP3-201ENST00000337331 LARSQ9P2J5 1176 aaKnown RBP17.42■□□□□ 0.38
NPHP3-201ENST00000337331 ANO9A1A5B4 782 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CLUL1Q15846 466 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CFAP157Q5JU67 520 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 ZNF658Q5TYW1 1059 aaPredicted RBP17.41■□□□□ 0.38
NPHP3-201ENST00000337331 C3orf20Q8ND61 904 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CHURC1Q8WUH1 139 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CNOT10Q9H9A5 744 aaKnown RBP17.41■□□□□ 0.38
NPHP3-201ENST00000337331 METTL14Q9HCE5 456 aaKnown RBP17.41■□□□□ 0.38
NPHP3-201ENST00000337331 IRF6O14896 467 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 BAG2O95816 211 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 IFNB1P01574 187 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 SEPT6Q14141 434 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 EXOC3L4Q17RC7 722 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 TET3O43151 1660 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CCT8L1PA6NM43 557 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 H0YIN7 160 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 RASSF2P50749 326 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 KLC1Q07866 573 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 PABPC4Q13310 644 aaKnown RBP eCLIP17.41■□□□□ 0.38
NPHP3-201ENST00000337331 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 KDM7AQ6ZMT4 941 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 FBXO11Q86XK2 927 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 GJA3Q9Y6H8 435 aa17.41■□□□□ 0.38
NPHP3-201ENST00000337331 CCND1P24385 295 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 TPP2P29144 1249 aaPredicted RBP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ACBD5Q5T8D3 534 aaPredicted RBP17.4■□□□□ 0.38
NPHP3-201ENST00000337331 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ZNF449Q6P9G9 518 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 KRT26Q7Z3Y9 468 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 ARHGAP22Q7Z5H3 698 aa17.4■□□□□ 0.38
NPHP3-201ENST00000337331 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms