RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 NOX5Q96PH1 765 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 PANK4Q9NVE7 773 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 POTEB3A0JP26 581 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 POTECB2RU33 542 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 PPFIA4O75335 1185 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 LCA5LO95447 670 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 RFC4P35249 363 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 PPP1R2P41236 205 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 ATP1A2P50993 1020 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 TTMPQ5BVD1 217 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 POTEBQ6S5H4 581 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 MTMR4Q9NYA4 1195 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 ADAMTS1Q9UHI8 967 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 KIAA1024Q9UPX6 916 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 COL4A3BPQ9Y5P4 624 aa19.17■□□□□ 0.66
PTP4A3-201ENST00000329397 A0A087X0T9 212 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L15C9J2P7 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L13C9JLJ4 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L11C9JVI0 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L18D6R9N7 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L22D6RA61 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L17D6RBQ6 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L19D6RCP7 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L20D6RJB6 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 FAM228BP0C875 321 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 PAFAH1B1P43034 410 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 IRAK1P51617 712 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L24Q0WX57 530 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 SHROOM1Q2M3G4 852 aaPredicted RBP19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 FAM26FQ5R3K3 315 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L6PQ6QN14 398 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 ADGRF4Q8IZF3 695 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 TSG101Q99816 390 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 ACTN1P12814 892 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 EHHADHQ08426 723 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 SEMA3FQ13275 785 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 TSPYL1Q9H0U9 437 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 JMJD4Q9H9V9 463 aa19.16■□□□□ 0.66
PTP4A3-201ENST00000329397 USP17L10C9JJH3 530 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 TAL1P17542 331 aaPredicted RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 GNGT1P63211 74 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 GUCY2DQ02846 1103 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 COBLL1Q53SF7 1204 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 EPB41L5Q9HCM4 733 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 SAMM50Q9Y512 469 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 RIMBP2O15034 1052 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 TMEM119Q4V9L6 283 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 SFMBT2Q5VUG0 894 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 PACS2Q86VP3 889 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 ZIM3Q96PE6 472 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 KRT12Q99456 494 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 BCAS3Q9H6U6 928 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 MPHOSPH10O00566 681 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 HEXIM1O94992 359 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 FKBP3Q00688 224 aaKnown RBP19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 SLC9C1Q4G0N8 1177 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 RAB34Q9BZG1 259 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 PCDHA12Q9UN75 941 aa19.15■□□□□ 0.66
PTP4A3-201ENST00000329397 ESYT2A0FGR8 921 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 GTF2IP78347 998 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 PDCLQ13371 301 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 HERC4Q5GLZ8 1057 aaPredicted RBP19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 COL24A1Q17RW2 1714 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 MYH4Q9Y623 1939 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 C6orf229H3BNL8 230 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 FGFR1OPO95684 399 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 CASP5P51878 434 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 SNAP25P60880 206 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 KIAA0753Q2KHM9 967 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 BCAS4Q8TDM0 211 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 CCDC43Q96MW1 224 aaKnown RBP19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 C8orf37Q96NL8 207 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 CAPS2Q9BXY5 557 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 POLLQ9UGP5 575 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
PTP4A3-201ENST00000329397 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 MEIS1O00470 390 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 PJA2O43164 708 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 POTEIP0CG38 1075 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 EPHB4P54760 987 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 POTEGQ6S5H5 508 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 KLHL7Q8IXQ5 586 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 RUFY1Q96T51 708 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 GRIN2DO15399 1336 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 CEP72Q9P209 647 aa19.13■□□□□ 0.65
PTP4A3-201ENST00000329397 PRLRP16471 622 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 SCNN1DP51172 638 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 CORO7P57737 925 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 CFAP221Q4G0U5 840 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms