RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 TSKSQ9UJT2 592 aa17.33■□□□□ 0.37
SLC39A1-201ENST00000310483 FGFR1OPO95684 399 aaKnown RBP17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 GNA11P29992 359 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 MDH1P40925 334 aaKnown RBP17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 ITGB3BPQ13352 177 aaPredicted RBP17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 MREGQ8N565 214 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 NCAPGQ9BPX3 1015 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.36
SLC39A1-201ENST00000310483 E7EVH7 732 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 BACH1O14867 736 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 IFT88Q13099 833 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 HLTFQ14527 1009 aaKnown RBP eCLIP17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 TSG101Q99816 390 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 ABCB11O95342 1321 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 KCNK3O14649 394 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 ECHS1P30084 290 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 COASYQ13057 564 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 CD302Q8IX05 232 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 MYOCDQ8IZQ8 938 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 NEUROG2Q9H2A3 272 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 GEMIN8Q9NWZ8 242 aaKnown RBP17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 ZNF652Q9Y2D9 606 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 FRMPD2Q68DX3 1309 aaPredicted RBP17.32■□□□□ 0.36
SLC39A1-201ENST00000310483 NPHP3-ACAD11A0A0J9YXS1 232 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 USP17L5A8MUK1 530 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 FSBPO95073 299 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 UAP1Q16222 522 aaPredicted RBP17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 ZCWPW2Q504Y3 356 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 RNF14Q9UBS8 474 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 HSD17B3P37058 310 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 EYA3Q99504 573 aa17.31■□□□□ 0.36
SLC39A1-201ENST00000310483 ACTN1P12814 892 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 FLT3P36888 993 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.361e-8■■■■■ 32.1
SLC39A1-201ENST00000310483 KLHL30Q0D2K2 578 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 WHAMMQ8TF30 809 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 A6NNZ2 444 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 MYBP10242 640 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 TMOD1P28289 359 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 HSPA9P38646 679 aaKnown RBP17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 FKBP3Q00688 224 aaKnown RBP17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 SPRED3Q2MJR0 410 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 TUBB8Q3ZCM7 444 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 CABS1Q96KC9 395 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 EDEM3Q9BZQ6 932 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 BCCIPQ9P287 314 aaKnown RBP eCLIP17.3■□□□□ 0.36
SLC39A1-201ENST00000310483 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 FAM170AA1A519 330 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 UBE2SQ16763 222 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 TMEM266Q2M3C6 531 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 KRT79Q5XKE5 535 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 CEP95Q96GE4 821 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 MYCBPQ99417 103 aaPredicted RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 LZTS2Q9BRK4 669 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 HMGB1P1B2RPK0 211 aaPredicted RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 CEP104O60308 925 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 TNNI2P48788 182 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 CDK8P49336 464 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 QPCTQ16769 361 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 TMEM119Q4V9L6 283 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 EMC10Q5UCC4 262 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 JPH2Q9BR39 696 aaPredicted RBP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.29■□□□□ 0.36
SLC39A1-201ENST00000310483 H0YGN5 161 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 TNNC1P63316 161 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 ASIC2Q16515 512 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 DDX47Q9H0S4 455 aaKnown RBP17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 ISCUQ9H1K1 167 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 NFS1Q9Y697 457 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 E9PMD0 336 aa17.28■□□□□ 0.36
SLC39A1-201ENST00000310483 KCNQ2O43526 872 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms