RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 GIT2Q14161 759 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 ZYXQ15942 572 aaKnown RBP18.34■□□□□ 0.53
TVP23B-201ENST00000307767 SYT2Q8N9I0 419 aaPredicted RBP18.34■□□□□ 0.53
TVP23B-201ENST00000307767 TEPSINQ96N21 525 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 ARID3AQ99856 593 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 CGNQ9P2M7 1197 aaKnown RBP18.34■□□□□ 0.53
TVP23B-201ENST00000307767 A0A1W2PQJ5 194 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 ZBED6P86452 979 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 RAD51AP2Q09MP3 1159 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 ZC3H3Q8IXZ2 948 aaKnown RBP18.34■□□□□ 0.53
TVP23B-201ENST00000307767 NUP58Q9BVL2 599 aa18.34■□□□□ 0.53
TVP23B-201ENST00000307767 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 NFKBIEO00221 500 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 CFBP00751 764 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 H2AFXP16104 143 aaPredicted RBP18.33■□□□□ 0.52
TVP23B-201ENST00000307767 POLD1P28340 1107 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 INPP5BP32019 993 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 HOXD13P35453 343 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 PTGER2P43116 358 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 CASP5P51878 434 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 MAN2A1Q16706 1144 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 MYOZ2Q9NPC6 264 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 TRIM10Q9UDY6 481 aa18.33■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF536O15090 1300 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 KCNMA1Q12791 1236 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 HAUS3Q68CZ6 603 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 TEX2Q8IWB9 1127 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 CHURC1Q8WUH1 139 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 HSD17B14Q9BPX1 270 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 DEFB129Q9H1M3 183 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 TFR2Q9UP52 801 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 PSMD10O75832 226 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 TRIM21P19474 475 aaKnown RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 HNRNPH3P31942 346 aaKnown RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 TGFB2P61812 414 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF569Q5MCW4 686 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 CIAPIN1Q6FI81 312 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 SLC35F6Q8N357 371 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 EIF2AK1Q9BQI3 630 aaKnown RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 POLR3CQ9BUI4 534 aaPredicted RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
TVP23B-201ENST00000307767 RGL1Q9NZL6 768 aa18.32■□□□□ 0.52
TVP23B-201ENST00000307767 ERCC3P19447 782 aa18.31■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF280AP59817 542 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-201ENST00000307767 RASA3Q14644 834 aa18.31■□□□□ 0.52
TVP23B-201ENST00000307767 HERC4Q5GLZ8 1057 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-201ENST00000307767 EPM2AIP1Q7L775 607 aaPredicted RBP18.31■□□□□ 0.52
TVP23B-201ENST00000307767 LDHDQ86WU2 507 aa18.31■□□□□ 0.52
TVP23B-201ENST00000307767 FBXO41Q8TF61 875 aa18.31■□□□□ 0.52
TVP23B-201ENST00000307767 RCCD1A6NED2 376 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-201ENST00000307767 KIF5CO60282 957 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 UBXN2AP68543 259 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 CDK17Q00537 523 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 FKBP3Q00688 224 aaKnown RBP18.3■□□□□ 0.52
TVP23B-201ENST00000307767 CYP4A11Q02928 519 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 B3GNT9Q6UX72 402 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 RSRC2Q7L4I2 434 aaKnown RBP18.3■□□□□ 0.52
TVP23B-201ENST00000307767 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 NELFCDQ8IXH7 590 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 ZFP91Q96JP5 570 aaPredicted RBP18.3■□□□□ 0.52
TVP23B-201ENST00000307767 REEP2Q9BRK0 252 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF446Q9NWS9 450 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF263O14978 683 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 PRELPP51888 382 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 MARSP56192 900 aaKnown RBP18.3■□□□□ 0.52
TVP23B-201ENST00000307767 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 BAP1Q92560 729 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 EMILIN3Q9NT22 766 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 DNM3Q9UQ16 869 aa18.3■□□□□ 0.52
TVP23B-201ENST00000307767 ASTN2O75129 1339 aaPredicted RBP18.29■□□□□ 0.52
TVP23B-201ENST00000307767 EFCAB8A8MWE9 144 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 SLITRK3O94933 977 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 FGFR1OPO95684 399 aaKnown RBP18.29■□□□□ 0.52
TVP23B-201ENST00000307767 TFRCP02786 760 aaKnown RBP18.29■□□□□ 0.52
TVP23B-201ENST00000307767 ASNSP08243 561 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 PPP2R3AQ06190 1150 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 DGKZQ13574 1117 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 ZNF662Q6ZS27 426 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 ERMNQ8TAM6 284 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 AGBL1Q96MI9 1066 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 TSG101Q99816 390 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 EPC1Q9H2F5 836 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 NHEJ1Q9H9Q4 299 aaPredicted RBP18.29■□□□□ 0.52
TVP23B-201ENST00000307767 COL20A1Q9P218 1284 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 PLAGL2Q9UPG8 496 aa18.29■□□□□ 0.52
TVP23B-201ENST00000307767 COL4A3BPQ9Y5P4 624 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms