RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GYG1P46976 350 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 KIF11P52732 1056 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 SPIRE1Q08AE8 756 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 GPS2Q13227 327 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 TXNRD1Q16881 649 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 RRAGBQ5VZM2 374 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 HELBQ8NG08 1087 aaPredicted RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 CNOT6LQ96LI5 555 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 DEFB129Q9H1M3 183 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 MKNK2Q9HBH9 465 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 CWC15Q9P013 229 aaKnown RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 TTC7AQ9ULT0 858 aaPredicted RBP6.04□□□□□ -1.44
VPS50-202ENST00000305866 USP20Q9Y2K6 914 aa6.04□□□□□ -1.44
VPS50-202ENST00000305866 ZMYM2Q9UBW7 1377 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 USP17L12C9JPN9 530 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 USP17L21D6R901 530 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 ALAS1P13196 640 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 TCEAL1Q15170 157 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 CCDC122Q5T0U0 273 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 TATDN2Q93075 761 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 MKL1Q969V6 931 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PACSIN1Q9BY11 444 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 EBF2Q9HAK2 575 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 EURLQ9NYK6 297 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 DONSONQ9NYP3 566 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 LRP2BPQ9P2M1 347 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 DAAM1Q9Y4D1 1078 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 FRMPD4Q14CM0 1322 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 FNDC1Q4ZHG4 1894 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 LRRC53A6NM62 1247 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 N4BP3O15049 544 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 EIF3JO75822 258 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 FAM107AO95990 144 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PLCG1P19174 1290 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 HMGB2P26583 209 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 ANXA13P27216 316 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 MDH1P40925 334 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 GUCY1A3Q02108 690 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PDCLQ13371 301 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 VWA3BQ502W6 1294 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 ANKRD20A8PQ5CZ79 823 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 KLHL10Q6JEL2 608 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 CGB2Q6NT52 195 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 ZDHHC24Q6UX98 284 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 LRIG3Q6UXM1 1119 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 KRT25Q7Z3Z0 450 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PPFIBP1Q86W92 1011 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 CCDC13Q8IYE1 715 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PROM2Q8N271 834 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 HAS1Q92839 578 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 L3MBTL3Q96JM7 780 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 FBXL5Q9UKA1 691 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 NR2E1Q9Y466 385 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 DDX3YO15523 660 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 EIF4A3P38919 411 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 CCNG1P51959 295 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 PPATQ06203 517 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 SIX1Q15475 284 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 KCTD19Q17RG1 926 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 CDCA2Q69YH5 1023 aaPredicted RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 PIK3AP1Q6ZUJ8 805 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 RNF10Q8N5U6 811 aaKnown RBP6.03□□□□□ -1.44
VPS50-202ENST00000305866 USP38Q8NB14 1042 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 RASGRP4Q8TDF6 673 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 KCNN1Q92952 543 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 ISCUQ9H1K1 167 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 CD248Q9HCU0 757 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 MAPK8IP1Q9UQF2 711 aa6.03□□□□□ -1.44
VPS50-202ENST00000305866 GOLGA6CA6NDK9 693 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 GOLGA6BA6NDN3 693 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 RAD51CO43502 376 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 GOLGA6DP0CG33 693 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 KLRC1P26715 233 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 HSD17B3P37058 310 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 SEC24CP53992 1094 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 GFPT1Q06210 699 aaPredicted RBP6.02□□□□□ -1.45
VPS50-202ENST00000305866 ARSHQ5FYA8 562 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 ASRGL1Q7L266 308 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 AMIGO3Q86WK7 504 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 FUKQ8N0W3 1084 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 MIGA1Q8NAN2 632 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 ACTRT1Q8TDG2 376 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 HES6Q96HZ4 224 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 CCT8L2Q96SF2 557 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 NDST4Q9H3R1 872 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 CXorf56Q9H5V9 222 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 GOLGA6AQ9NYA3 693 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 ATRNL1Q5VV63 1379 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 PAPPA2Q9BXP8 1791 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 PPFIA2O75334 1257 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 PPP1R37O75864 691 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
VPS50-202ENST00000305866 GNGT1P63211 74 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 GHRHRQ02643 423 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 KLRC3Q07444 240 aa6.02□□□□□ -1.45
VPS50-202ENST00000305866 ZRSR1Q15695 479 aaKnown RBP6.02□□□□□ -1.45
VPS50-202ENST00000305866 SPDYCQ5MJ68 293 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms