RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 GDF11O95390 407 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 C2orf54Q08AI8 447 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 HERC4Q5GLZ8 1057 aaPredicted RBP22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 SIAH1Q8IUQ4 282 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 ZDHHC15Q96MV8 337 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 CRACR2AQ9BSW2 395 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 ZHX3Q9H4I2 956 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 ADAM21Q9UKJ8 722 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 CKAP4Q07065 602 aaKnown RBP22.07■■□□□ 1.12
SCUBE1-201ENST00000290460 PDXDC1Q6P996 788 aa22.07■■□□□ 1.12
SCUBE1-201ENST00000290460 HINFPQ9BQA5 517 aa22.07■■□□□ 1.12
SCUBE1-201ENST00000290460 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
SCUBE1-201ENST00000290460 SALL4Q9UJQ4 1053 aa22.07■■□□□ 1.12
SCUBE1-201ENST00000290460 CYP11B2P19099 503 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 ALDH1B1P30837 517 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 USH1GQ495M9 461 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 TRIM58Q8NG06 486 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 SCFD1Q8WVM8 642 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 PSMB7Q99436 277 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 VPS18Q9P253 973 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 LCA5LO95447 670 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 PRR16Q569H4 304 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 CCDC65Q8IXS2 484 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 GSPT2Q8IYD1 628 aaKnown RBP22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 COG1Q8WTW3 980 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 ZNF622Q969S3 477 aaKnown RBP eCLIP22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 GDAP1L1Q96MZ0 367 aa22.06■■□□□ 1.12
SCUBE1-201ENST00000290460 TACC1O75410 805 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 NOL4O94818 638 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 TUBBP07437 444 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 USP11P51784 963 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 ICA1Q05084 483 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 TDRD12Q587J7 1177 aaKnown RBP22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 ARSHQ5FYA8 562 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 HGSNATQ68CP4 663 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 DCAF4Q8WV16 495 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 MKL1Q969V6 931 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 ZNF219Q9P2Y4 722 aaPredicted RBP22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 SNX12Q9UMY4 172 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 JRKLQ9Y4A0 524 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 MEIS1O00470 390 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 EIF3JO75822 258 aaKnown RBP22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 MMP10P09238 476 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 PSMC6P62333 389 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 ARHGAP4P98171 946 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 GPS2Q13227 327 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 CREG2Q8IUH2 290 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 NLGN1Q8N2Q7 840 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 NYAP2Q9P242 653 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 PI4KBQ9UBF8 816 aa22.05■■□□□ 1.12
SCUBE1-201ENST00000290460 PHACTR2O75167 634 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 KRT18P05783 430 aaKnown RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CXCR5P32302 372 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 MAGEA1P43355 309 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CASP5P51878 434 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 ASTE1Q2TB18 679 aaPredicted RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 MSL1Q68DK7 614 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CCDC102AQ96A19 550 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 LSM14BQ9BX40 385 aaKnown RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 KCTD10Q9H3F6 313 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 EMILIN3Q9NT22 766 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CCDC66A2RUB6 948 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 TLR2O60603 784 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 MYBL2P10244 700 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 SLC12A3P55017 1021 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 POLR2FP61218 127 aaKnown RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 RASSF7Q02833 373 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 SPIRE1Q08AE8 756 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 NFRKBQ6P4R8 1299 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 FOXR2Q6PJQ5 311 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 PODNQ7Z5L7 613 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CATSPER3Q86XQ3 398 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 MASTLQ96GX5 879 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 RPGRIP1Q96KN7 1286 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 NAP1L4Q99733 375 aaKnown RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 DHX36Q9H2U1 1008 aaKnown RBP22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 SMARCAL1Q9NZC9 954 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 FAN1Q9Y2M0 1017 aa22.04■■□□□ 1.12
SCUBE1-201ENST00000290460 CYP3A7-CYP3A51PA0A087WV96 503 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 F5H6K3 240 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 NCK2O43639 380 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 CYP3A7P24462 503 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 KLRC3Q07444 240 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 IKQ13123 557 aaPredicted RBP22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 ETNPPLQ8TBG4 499 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 CRYGNQ8WXF5 182 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 GLT8D2Q9H1C3 349 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 EHD2Q9NZN4 543 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 BUB1O43683 1085 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 PDE6BP35913 854 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 TNNT3P45378 269 aaPredicted RBP22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 JAG1P78504 1218 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 PABPC4Q13310 644 aaKnown RBP eCLIP22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 TRIM59Q8IWR1 403 aa22.03■■□□□ 1.12
SCUBE1-201ENST00000290460 MBOAT7Q96N66 472 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms