RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 MARK3P27448 753 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 YWHAHQ04917 246 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 GNPTABQ3T906 1256 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 RAB44Q7Z6P3 723 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 FAM186BQ8IYM0 893 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 HEMGNQ9BXL5 484 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 GGT7Q9UJ14 662 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 SCINQ9Y6U3 715 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 HSP90AA5PQ58FG0 334 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 JRKLQ9Y4A0 524 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 PRAMEF22A3QJZ6 481 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 KIF19Q2TAC6 998 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 TLR3O15455 904 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 ZNF394Q53GI3 561 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 ARHGEF18Q6ZSZ5 1173 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 INO80B-WBP1J3KQ70 363 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PGRMC1O00264 195 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 LPXNO60711 386 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 RSRC2Q7L4I2 434 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 INO80BQ9C086 356 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 H3BRJ5 948 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 TRIM67Q6ZTA4 783 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 TRIM59Q8IWR1 403 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 TBCKQ8TEA7 893 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 CHURC1Q8WUH1 139 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PPP1R36Q96LQ0 422 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PCDHB6Q9Y5E3 794 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 ESRRGP62508 458 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 BEND6Q5SZJ8 279 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PIGSQ96S52 555 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 TM6SF1Q9BZW5 370 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 YY1AP1Q9H869 796 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 THOC5Q13769 683 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
TSPAN3-201ENST00000267970 EVI5O60447 810 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 RPS8P62241 208 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 PPP2R5EQ16537 467 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 OR6B2Q6IFH4 312 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 TRAIPQ9BWF2 469 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 MCF2LO15068 1137 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 N4BP1O75113 896 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 RASGRF2O14827 1237 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 PSMC2P35998 433 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 DR1Q01658 176 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 RGS9BPQ6ZS82 235 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 KMT5AQ9NQR1 393 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 LONP1P36776 959 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 TRIML2Q8N7C3 387 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 ZCWPW1Q9H0M4 648 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 IPO11Q9UI26 975 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 BCS1LQ9Y276 419 aa18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 PDZD4Q76G19 769 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 PRPF38AQ8NAV1 312 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-201ENST00000267970 OCRLQ01968 901 aa18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 USP17L2Q6R6M4 530 aa18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 RINLQ6ZS11 566 aa18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 MTRQ99707 1265 aa18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 THEGQ9P2T0 379 aa18.14■□□□□ 0.5
TSPAN3-201ENST00000267970 HOXA13P31271 388 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 SOX5P35711 763 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 TLK1Q9UKI8 766 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 MRPL11Q9Y3B7 192 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 AGR3Q8TD06 166 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 TTC7AQ9ULT0 858 aaPredicted RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 NCK2O43639 380 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 POLR2BP30876 1174 aaKnown RBP18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 LRRC14Q15048 493 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 GRAMD4Q6IC98 578 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 BBOF1Q8ND07 529 aa18.14■□□□□ 0.49
TSPAN3-201ENST00000267970 KRT14P02533 472 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 CYP21A2P08686 494 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 CA4P22748 312 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 SKOR1P84550 965 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 CTTNQ14247 550 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 MDH1BQ5I0G3 518 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 SYCP2LQ5T4T6 812 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 C16orf87Q6PH81 154 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
TSPAN3-201ENST00000267970 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms