RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
NR1D1-201ENST00000246672 ZNF570Q96NI8 536 aa13.69□□□□□ -0.22
NR1D1-201ENST00000246672 TRIM9Q9C026 710 aa13.69□□□□□ -0.22
NR1D1-201ENST00000246672 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
NR1D1-201ENST00000246672 TNS2Q63HR2 1409 aa13.69□□□□□ -0.22
NR1D1-201ENST00000246672 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
NR1D1-201ENST00000246672 BAZ2AQ9UIF9 1905 aaKnown RBP13.69□□□□□ -0.22
NR1D1-201ENST00000246672 INF2Q27J81 1249 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 AGBL2Q5U5Z8 902 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 CAPRIN2Q6IMN6 1127 aaKnown RBP13.68□□□□□ -0.22
NR1D1-201ENST00000246672 CCDC197Q8NCU1 140 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 BAP1Q92560 729 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
NR1D1-201ENST00000246672 SH3GL3Q99963 347 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 KLRC1P26715 233 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 TDRD12Q587J7 1177 aaKnown RBP13.68□□□□□ -0.22
NR1D1-201ENST00000246672 KIAA0895Q8NCT3 520 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 MICAL1Q8TDZ2 1067 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 XPO6Q96QU8 1125 aaKnown RBP13.68□□□□□ -0.22
NR1D1-201ENST00000246672 SLC12A4Q9UP95 1085 aa13.68□□□□□ -0.22
NR1D1-201ENST00000246672 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 CCDC194A0A1B0GVG4 234 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 CTNND1O60716 968 aaKnown RBP13.67□□□□□ -0.22
NR1D1-201ENST00000246672 ADCY2Q08462 1091 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 RIPK1Q13546 671 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 MEI1Q5TIA1 1274 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 AP1ARQ63HQ0 302 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.67□□□□□ -0.22
NR1D1-201ENST00000246672 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
NR1D1-201ENST00000246672 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 DIAPH2O60879 1101 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 CALML3P27482 149 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 ICA1Q05084 483 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 KRT71Q3SY84 523 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
NR1D1-201ENST00000246672 ERMARDQ5T6L9 678 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 CABP7Q86V35 215 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 RIOK1Q9BRS2 568 aaKnown RBP13.67□□□□□ -0.22
NR1D1-201ENST00000246672 TMEM59LQ9UK28 342 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
NR1D1-201ENST00000246672 ANKRD33BA6NCL7 494 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 IRF6O14896 467 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 CUL1Q13616 776 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 ACSBG1Q96GR2 724 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 FLT1P17948 1338 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 USP17L21D6R901 530 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 NAB2Q15742 525 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 TXNRD1Q16881 649 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 CACNA2D4Q7Z3S7 1137 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PSMD1Q99460 953 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 FAM129AQ9BZQ8 928 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 AP1G2O75843 785 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 EIF1ADQ8N9N8 165 aaKnown RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 ZNF317Q96PQ6 595 aaPredicted RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 AP1M1Q9BXS5 423 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 NOP53Q9NZM5 478 aaKnown RBP13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PNMA2Q9UL42 364 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PCDHA6Q9UN73 950 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 PCDHA8Q9Y5H6 950 aa13.66□□□□□ -0.22
NR1D1-201ENST00000246672 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 KCNK3O14649 394 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 STARD3NLO95772 234 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 GSTA1P08263 222 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 KCNJ2P63252 427 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
NR1D1-201ENST00000246672 MAN2A1Q16706 1144 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 CCHCR1Q8TD31 782 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 KCNMB3Q9NPA1 279 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 RBAK-RBAKDNI3L0D1 243 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
NR1D1-201ENST00000246672 DAPK3O43293 454 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 PTPROQ16827 1216 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
NR1D1-201ENST00000246672 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 PACSIN1Q9BY11 444 aa13.65□□□□□ -0.22
NR1D1-201ENST00000246672 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms