RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 A1CFQ9NQ94 594 aaKnown RBP20.28■□□□□ 0.84
VIM-201ENST00000224237 CYP39A1Q9NYL5 469 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 RWDD2AQ9UIY3 292 aa20.28■□□□□ 0.84
VIM-201ENST00000224237 POTEFA5A3E0 1075 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 E9PMD0 336 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 CELF2O95319 508 aaKnown RBP20.27■□□□□ 0.84
VIM-201ENST00000224237 PAK1Q13153 545 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 MTMR1Q13613 665 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 POTEGQ6S5H5 508 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 RIOX2Q8IUF8 465 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 DRC7Q8IY82 874 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 SPC24Q8NBT2 197 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 DDX12PQ92771 950 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
VIM-201ENST00000224237 BMP2KQ9NSY1 1161 aaPredicted RBP20.27■□□□□ 0.84
VIM-201ENST00000224237 BTBD7Q9P203 1132 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 CTNND2Q9UQB3 1225 aa20.27■□□□□ 0.84
VIM-201ENST00000224237 EML1O00423 815 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 PLA2G4BP0C869 781 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 ATP1A3P13637 1013 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 PPP1R2P41236 205 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 PRCPP42785 496 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 FKBP1BP68106 108 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 FANCCQ00597 558 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 MKRN3Q13064 507 aaKnown RBP20.26■□□□□ 0.83
VIM-201ENST00000224237 NSUN6Q8TEA1 469 aaKnown RBP20.26■□□□□ 0.83
VIM-201ENST00000224237 GBA2Q9HCG7 927 aaPredicted RBP20.26■□□□□ 0.83
VIM-201ENST00000224237 TUFT1Q9NNX1 390 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 FBXO40Q9UH90 709 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
VIM-201ENST00000224237 ZNF18P17022 549 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 CCND2P30279 289 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 CLCN1P35523 988 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 HERVK_113P62684 666 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 SNAPC2Q13487 334 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 B3GNT9Q6UX72 402 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 DYMQ7RTS9 669 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 ADSSL1Q8N142 457 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 AGO4Q9HCK5 861 aaKnown RBP20.26■□□□□ 0.83
VIM-201ENST00000224237 IFNKQ9P0W0 207 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 DNM3Q9UQ16 869 aa20.26■□□□□ 0.83
VIM-201ENST00000224237 CHMP2AO43633 222 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 SERPINC1P01008 464 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 TPM3P06753 285 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 MUTP22033 750 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 STX17P56962 302 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 NELFBQ8WX92 580 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 HSD17B14Q9BPX1 270 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 XPO4Q9C0E2 1151 aaKnown RBP20.25■□□□□ 0.83
VIM-201ENST00000224237 SPATC1LQ9H0A9 340 aa20.25■□□□□ 0.83
VIM-201ENST00000224237 CBFA2T2O43439 604 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
VIM-201ENST00000224237 OSBPP22059 807 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 SLC12A3P55017 1021 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 CYP4A11Q02928 519 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 COBLL1Q53SF7 1204 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 GPAT2Q6NUI2 795 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 PFASO15067 1338 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 PSMA7O14818 248 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 NR3C2P08235 984 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 CDK11BP21127 795 aaKnown RBP20.24■□□□□ 0.83
VIM-201ENST00000224237 EPHA7Q15375 998 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 TPD52L1Q16890 204 aaPredicted RBP20.24■□□□□ 0.83
VIM-201ENST00000224237 VSIG10LQ86VR7 867 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 ZSCAN30Q86W11 494 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 TBC1D22BQ9NU19 505 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 MAPK8IP1Q9UQF2 711 aa20.24■□□□□ 0.83
VIM-201ENST00000224237 IDEP14735 1019 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 UBASH3AP57075 661 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 STK4Q13043 487 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 PSMD2Q13200 908 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 GPBP1Q86WP2 473 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 ANKRD35Q8N283 1001 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 SYT2Q8N9I0 419 aaPredicted RBP20.23■□□□□ 0.83
VIM-201ENST00000224237 DNAJC19Q96DA6 116 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 DHTKD1Q96HY7 919 aaPredicted RBP20.23■□□□□ 0.83
VIM-201ENST00000224237 SAMSN1Q9NSI8 373 aaKnown RBP20.23■□□□□ 0.83
VIM-201ENST00000224237 RGL1Q9NZL6 768 aa20.23■□□□□ 0.83
VIM-201ENST00000224237 TESPA1A2RU30 521 aaPredicted RBP20.22■□□□□ 0.83
VIM-201ENST00000224237 MAFGO15525 162 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 DHX15O43143 795 aaKnown RBP20.22■□□□□ 0.83
VIM-201ENST00000224237 STAM2O75886 525 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 SLITRK3O94933 977 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 CYP11B2P19099 503 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 CST9Q5W186 159 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 NLRX1Q86UT6 975 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 DNERQ8NFT8 737 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 GPRASP2Q96D09 838 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 DYDC2Q96IM9 177 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 R3HDMLQ9H3Y0 253 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 CNMDO75829 334 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 FCER1AP12319 257 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 COPB2P35606 906 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 PSMC6P62333 389 aa20.22■□□□□ 0.83
VIM-201ENST00000224237 EHHADHQ08426 723 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms