RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C SVL3Q03088 825 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C NHP10Q03435 203 aa4.72□□□□□ -1.65
CAF4YKR036C PML39Q03760 334 aa4.72□□□□□ -1.65
CAF4YKR036C YDR514CQ04408 483 aa4.72□□□□□ -1.65
CAF4YKR036C YLR224WQ05947 369 aa4.72□□□□□ -1.65
CAF4YKR036C ARV1Q06541 321 aa4.72□□□□□ -1.65
CAF4YKR036C ESC8Q08119 714 aa4.72□□□□□ -1.65
CAF4YKR036C GSH2Q08220 491 aa4.72□□□□□ -1.65
CAF4YKR036C IES4Q08561 116 aa4.72□□□□□ -1.65
CAF4YKR036C PKH2Q12236 1081 aaKnown RBP4.72□□□□□ -1.65
CAF4YKR036C SKM1Q12469 655 aa4.72□□□□□ -1.65
CAF4YKR036C PFK27Q12471 397 aaPredicted RBP4.72□□□□□ -1.65
CAF4YKR036C MHF1Q3E835 90 aa4.72□□□□□ -1.65
CAF4YKR036C ATP1P07251 545 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C HOM2P13663 365 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C BET2P20133 325 aa4.71□□□□□ -1.66
CAF4YKR036C PUP3P25451 205 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C PGS1P25578 521 aa4.71□□□□□ -1.66
CAF4YKR036C CTS1P29029 562 aa4.71□□□□□ -1.66
CAF4YKR036C URA10P30402 227 aa4.71□□□□□ -1.66
CAF4YKR036C PET127P32606 800 aa4.71□□□□□ -1.66
CAF4YKR036C GCS1P35197 352 aa4.71□□□□□ -1.66
CAF4YKR036C YBL029WP38201 376 aa4.71□□□□□ -1.66
CAF4YKR036C FSH1P38777 243 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C YIR016WP40572 265 aa4.71□□□□□ -1.66
CAF4YKR036C AVT1P47082 602 aa4.71□□□□□ -1.66
CAF4YKR036C ROM1P53046 1155 aa4.71□□□□□ -1.66
CAF4YKR036C YGL036WP53185 909 aaPredicted RBP4.71□□□□□ -1.66
CAF4YKR036C BUD32P53323 261 aa4.71□□□□□ -1.66
CAF4YKR036C YNL146WP53906 100 aa4.71□□□□□ -1.66
CAF4YKR036C NUP49Q02199 472 aa4.71□□□□□ -1.66
CAF4YKR036C REC102Q02721 264 aa4.71□□□□□ -1.66
CAF4YKR036C ELP3Q02908 557 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C SPP1Q03012 353 aa4.71□□□□□ -1.66
CAF4YKR036C RNH1Q04740 348 aa4.71□□□□□ -1.66
CAF4YKR036C BCH1Q05029 724 aa4.71□□□□□ -1.66
CAF4YKR036C ECM7Q06200 448 aa4.71□□□□□ -1.66
CAF4YKR036C IRC10Q08118 586 aa4.71□□□□□ -1.66
CAF4YKR036C YOR059CQ08448 450 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C SVS1Q12254 260 aa4.71□□□□□ -1.66
CAF4YKR036C SET6Q12529 373 aa4.71□□□□□ -1.66
CAF4YKR036C RRP12Q12754 1228 aaKnown RBP4.71□□□□□ -1.66
CAF4YKR036C YOR019WQ99248 730 aa4.71□□□□□ -1.66
CAF4YKR036C GCN4P03069 281 aa4.7□□□□□ -1.66
CAF4YKR036C RPP1AP05318 106 aaPredicted RBP4.7□□□□□ -1.66
CAF4YKR036C COS2P0CX12 379 aa4.7□□□□□ -1.66
CAF4YKR036C COS3P0CX13 379 aa4.7□□□□□ -1.66
CAF4YKR036C ABF1P14164 731 aa4.7□□□□□ -1.66
CAF4YKR036C AAC3P18238 307 aa4.7□□□□□ -1.66
CAF4YKR036C CDC42P19073 191 aa4.7□□□□□ -1.66
CAF4YKR036C SED4P25365 1065 aa4.7□□□□□ -1.66
CAF4YKR036C NTG1P31378 399 aa4.7□□□□□ -1.66
CAF4YKR036C RNP1P32385 249 aa4.7□□□□□ -1.66
CAF4YKR036C MKS1P34072 584 aa4.7□□□□□ -1.66
CAF4YKR036C BAP2P38084 609 aa4.7□□□□□ -1.66
CAF4YKR036C PEX28P38848 579 aa4.7□□□□□ -1.66
CAF4YKR036C CKB2P38930 258 aa4.7□□□□□ -1.66
CAF4YKR036C RFC2P40348 353 aa4.7□□□□□ -1.66
CAF4YKR036C MAF1P41910 395 aa4.7□□□□□ -1.66
CAF4YKR036C SSY5P47002 699 aa4.7□□□□□ -1.66
CAF4YKR036C YJL016WP47072 561 aa4.7□□□□□ -1.66
CAF4YKR036C BFA1P47113 574 aa4.7□□□□□ -1.66
CAF4YKR036C PRP24P49960 444 aaKnown RBP4.7□□□□□ -1.66
CAF4YKR036C MNP1P53163 194 aaPredicted RBP4.7□□□□□ -1.66
CAF4YKR036C EFM5P53200 248 aaKnown RBP4.7□□□□□ -1.66
CAF4YKR036C VPS9P54787 451 aa4.7□□□□□ -1.66
CAF4YKR036C PEX13P80667 386 aa4.7□□□□□ -1.66
CAF4YKR036C TOF2Q02208 771 aa4.7□□□□□ -1.66
CAF4YKR036C YML083CQ04526 418 aa4.7□□□□□ -1.66
CAF4YKR036C CDA2Q06703 312 aa4.7□□□□□ -1.66
CAF4YKR036C TRE2Q08693 809 aa4.7□□□□□ -1.66
CAF4YKR036C YPR063CQ12160 140 aa4.7□□□□□ -1.66
CAF4YKR036C BMT6Q12291 365 aa4.7□□□□□ -1.66
CAF4YKR036C DCN1Q12395 269 aa4.7□□□□□ -1.66
CAF4YKR036C YOS9Q99220 542 aa4.7□□□□□ -1.66
CAF4YKR036C DFG16Q99234 619 aa4.7□□□□□ -1.66
CAF4YKR036C AI4P03878 556 aa4.7□□□□□ -1.66
CAF4YKR036C MOD5P07884 428 aa4.7□□□□□ -1.66
CAF4YKR036C MAS1P10507 462 aa4.7□□□□□ -1.66
CAF4YKR036C APE1P14904 514 aa4.7□□□□□ -1.66
CAF4YKR036C AMD2P22580 549 aa4.7□□□□□ -1.66
CAF4YKR036C GID7P25569 745 aa4.7□□□□□ -1.66
CAF4YKR036C LYP1P32487 611 aa4.7□□□□□ -1.66
CAF4YKR036C FRE2P36033 711 aa4.7□□□□□ -1.66
CAF4YKR036C YKR051WP36142 418 aa4.7□□□□□ -1.66
CAF4YKR036C APT2P36973 181 aa4.7□□□□□ -1.66
CAF4YKR036C CCZ1P38273 704 aa4.7□□□□□ -1.66
CAF4YKR036C MBA1P38300 278 aa4.7□□□□□ -1.66
CAF4YKR036C GEP4P38812 185 aa4.7□□□□□ -1.66
CAF4YKR036C LNP1P38878 278 aa4.7□□□□□ -1.66
CAF4YKR036C AAD14P42884 376 aa4.7□□□□□ -1.66
CAF4YKR036C CNN1P43618 361 aa4.7□□□□□ -1.66
CAF4YKR036C RPE1P46969 238 aa4.7□□□□□ -1.66
CAF4YKR036C ECM27P47144 725 aa4.7□□□□□ -1.66
CAF4YKR036C PMT5P52867 743 aa4.7□□□□□ -1.66
CAF4YKR036C MNT2P53059 558 aa4.7□□□□□ -1.66
CAF4YKR036C AIM14P53109 570 aa4.7□□□□□ -1.66
CAF4YKR036C CUL3P53202 744 aa4.7□□□□□ -1.66
CAF4YKR036C ARP4P80428 489 aa4.7□□□□□ -1.66
CAF4YKR036C RMI1Q02685 241 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms