RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	ERVK-21	P61565	698 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	STXBP2	Q15833	593 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	DGKD	Q16760	1214 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	KIAA0753	Q2KHM9	967 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	C7orf31	Q8N865	590 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	PNMA1	Q8ND90	353 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	RGS22	Q8NE09	1264 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	NSUN6	Q8TEA1	469 aa	Known RBP	11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZFP91	Q96JP5	570 aa	Predicted RBP	11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	TTC14	Q96N46	770 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	RAD9A	Q99638	391 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	OSBPL7	Q9BZF2	842 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	PNMA2	Q9UL42	364 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	MRVI1	Q9Y6F6	885 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	ATG2A	Q2TAZ0	1938 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	HAS3	O00219	553 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	OPLAH	O14841	1288 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	GPR37L1	O60883	481 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	REC8	O95072	547 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	ARHGEF16	Q5VV41	709 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	TICAM2	Q86XR7	235 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	VAT1L	Q9HCJ6	419 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	ANO2	Q9NQ90	1003 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	PXMP2	Q9NR77	195 aa		11.65	□□□□□ -0.54
PHGDH-222	ENST00000641587	DOCK5	Q9H7D0	1870 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	MUC6	Q6W4X9	2439 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587		B4E1Z4	1266 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	PI4K2B	G5E9Z4	385 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	SGSM2	O43147	1006 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	DHX16	O60231	1041 aa	Known RBP	11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	KDM4A	O75164	1064 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	RGS20	O76081	388 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	CFB	P00751	764 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	NR3C2	P08235	984 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	PTK7	Q13308	1070 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	MKRN4P	Q13434	485 aa	Predicted RBP	11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	IKBKE	Q14164	716 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	HSDL1	Q3SXM5	330 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	FBXO11	Q86XK2	927 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	FAM178B	Q8IXR5	827 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	MYOCD	Q8IZQ8	938 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	FBXO22	Q8NEZ5	403 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	DBF4B	Q8NFT6	615 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	IL31RA	Q8NI17	732 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	PPTC7	Q8NI37	304 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	ESR2	Q92731	530 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	EMID1	Q96A84	441 aa	Predicted RBP	11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	IWS1	Q96ST2	819 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	JMJD4	Q9H9V9	463 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	LMCD1	Q9NZU5	365 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	MYO7A	Q13402	2215 aa		11.64	□□□□□ -0.55
PHGDH-222	ENST00000641587	NLRC5	Q86WI3	1866 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587		H3BQ06	376 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	PPP1R11	O60927	126 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	LGR5	O75473	907 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	PARN	O95453	639 aa	Known RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	SEC24B	O95487	1268 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	PC	P11498	1178 aa	Known RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	MYCL	P12524	364 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	THPO	P40225	353 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	LAMC2	Q13753	1193 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	LEXM	Q3ZCV2	418 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	ASPRV1	Q53RT3	343 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	DGKH	Q86XP1	1220 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	MCF2L2	Q86YR7	1114 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	DHX37	Q8IY37	1157 aa	Known RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	GJD3	Q8N144	294 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	STAG2	Q8N3U4	1231 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	ENAH	Q8N8S7	591 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	KATNAL1	Q9BW62	490 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	RNF41	Q9H4P4	317 aa	Predicted RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	BCAS3	Q9H6U6	928 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	KAT14	Q9H8E8	782 aa		11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	MRPL11	Q9Y3B7	192 aa	Known RBP	11.63	□□□□□ -0.55
PHGDH-222	ENST00000641587	ZNF213	O14771	459 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	EIF3J	O75822	258 aa	Known RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	GGPS1	O95749	300 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	CTSH	P09668	335 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	HOXD8	P13378	290 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	HOXA13	P31271	388 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	SSTR3	P32745	418 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	HSD17B4	P51659	736 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	SP2	Q02086	613 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	MYSM1	Q5VVJ2	828 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	IQCA1	Q86XH1	822 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	SPATA33	Q96N06	139 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	PDCD2L	Q9BRP1	358 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	IL25	Q9H293	177 aa		11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.62	□□□□□ -0.55
PHGDH-222	ENST00000641587	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.61	□□□□□ -0.55
PHGDH-222	ENST00000641587	RSPH10B2	B2RC85	870 aa		11.61	□□□□□ -0.55
PHGDH-222	ENST00000641587	EFCAB14	O75071	495 aa		11.61	□□□□□ -0.55
PHGDH-222	ENST00000641587	UPP2	O95045	317 aa		11.61	□□□□□ -0.55
PHGDH-222	ENST00000641587	PARP1	P09874	1014 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms