RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 FXR1P51114 621 aaKnown RBP eCLIP9.41□□□□□ -0.92e-8■□□□□ 9.2
HNRNPU-219ENST00000639628 GLE1Q53GS7 698 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 RAD9BQ6WBX8 426 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 ZNF365Q70YC5 407 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 MAIP1Q8WWC4 291 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 CEP95Q96GE4 821 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 PBKQ96KB5 322 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 TEKT3Q9BXF9 490 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 COA1Q9GZY4 146 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 CEP72Q9P209 647 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 ATP1A2P50993 1020 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 HNRNPH2P55795 449 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 CPVLQ9H3G5 476 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 STIM2Q9P246 746 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 RRP15Q9Y3B9 282 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 POTEMA6NI47 508 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 NF2P35240 595 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 TOB1P50616 345 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 DLGAP5Q15398 846 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 WDR78Q5VTH9 848 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 JDP2Q8WYK2 163 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 TRIM9Q9C026 710 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 ASIC3Q9UHC3 531 aa9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 FEZ2Q9UHY8 353 aaPredicted RBP9.41□□□□□ -0.9
HNRNPU-219ENST00000639628 ZBTB5O15062 677 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 USP14P54578 494 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 FAM186BQ8IYM0 893 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 MSANTD4Q8NCY6 345 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 EDEM3Q9BZQ6 932 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 LRRC53A6NM62 1247 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 K7ENM7 598 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 FTCDO95954 541 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 ZSCAN20P17040 1043 aaPredicted RBP9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 ODR4Q5SWX8 454 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 CPXCR1Q8N123 301 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 KCNG1Q9UIX4 513 aa9.4□□□□□ -0.9
HNRNPU-219ENST00000639628 TCRBV5S4A2TA0A5A2 114 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 SRGAP2O75044 1071 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 GYPCP04921 128 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 MYCLP12524 364 aaPredicted RBP9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 CDC37Q16543 378 aaPredicted RBP9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 WHAMMQ8TF30 809 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 MXD3Q9BW11 206 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 FAM114A2Q9NRY5 505 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 PI4KBQ9UBF8 816 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.91
HNRNPU-219ENST00000639628 UBE2Q2LH0YL09 131 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GAS8O95995 478 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 SRGNP10124 158 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GBP1P32455 592 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 SP4Q02446 784 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 STRN3Q13033 797 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GPR101Q96P66 508 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 WDR11Q9BZH6 1224 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 IQCGQ9H095 443 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 PDS5AQ29RF7 1337 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 TARSL2A2RTX5 802 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 RGS16O15492 202 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 CCT5P48643 541 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 PTPROQ16827 1216 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 DPH5Q9H2P9 285 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 BMP3P12645 472 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 MYL7Q01449 175 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 PDIA5Q14554 519 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 KCTD16Q68DU8 428 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GIMAP8Q8ND71 665 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 CHP1Q99653 195 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 ZBED4O75132 1171 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 H2AFXP16104 143 aaPredicted RBP9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 COASYQ13057 564 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 SEC23AQ15436 765 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 LARGE2Q8N3Y3 721 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 NACC1Q96RE7 527 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 FERMT1Q9BQL6 677 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 JCADQ9P266 1359 aa9.39□□□□□ -0.91
HNRNPU-219ENST00000639628 FCER1AP12319 257 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms