RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ANO3Q9BYT9 981 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
SNRPA1-216ENST00000626000 TNRC18O15417 2968 aaPredicted RBP16■□□□□ 0.15
SNRPA1-216ENST00000626000 DCDC2CA8MYV0 355 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 ARHGAP1Q07960 439 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 DGKDQ16760 1214 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 ANKRD33Q7Z3H0 272 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 DAGLBQ8NCG7 672 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 KIF2CQ99661 725 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 MTG1Q9BT17 334 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 KATNAL1Q9BW62 490 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 PCDHA4Q9UN74 947 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 KIF3AQ9Y496 699 aa15.99■□□□□ 0.15
SNRPA1-216ENST00000626000 MYADML2A6NDP7 307 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 PPFIA4O75335 1185 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 RGS20O76081 388 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 ARIH2O95376 493 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 RTP1P59025 263 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 SETQ01105 290 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 MTMR1Q13613 665 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 TRIM29Q14134 588 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 LY6KQ17RY6 165 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 CELF3Q5SZQ8 465 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 METTL7BQ6UX53 244 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 C7orf61Q8IZ16 206 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 JADE2Q9NQC1 790 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 VPS54Q9P1Q0 977 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 UBIAD1Q9Y5Z9 338 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
SNRPA1-216ENST00000626000 ARVCFO00192 962 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 GGPS1O95749 300 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 CYP3A4P08684 503 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 UBA1P22314 1058 aaKnown RBP15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 ZNF76P36508 570 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 PURAQ00577 322 aaKnown RBP15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 BEX3Q00994 111 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 PTPN11Q06124 597 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 CEP55Q53EZ4 464 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 MXRA8Q9BRK3 442 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 ATP11BQ9Y2G3 1177 aa15.97■□□□□ 0.15
SNRPA1-216ENST00000626000 MMP3P08254 477 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 MYL3P08590 195 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 SUPT20HL2P0C7V6 817 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 HOXD8P13378 290 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 USP11P51784 963 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 ITGA7Q13683 1181 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 TRIM60Q495X7 471 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 NFRKBQ6P4R8 1299 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 AFG1LQ8WV93 481 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 SPATA33Q96N06 139 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 NAP1L4Q99733 375 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 TCEAL9Q9UHQ7 104 aa15.96■□□□□ 0.15
SNRPA1-216ENST00000626000 H0YGN5 161 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 CLTBP09497 229 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 ITGB5P18084 799 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 JAKMIP3Q5VZ66 844 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 KRT25Q7Z3Z0 450 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 NECAB1Q8N987 351 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 SLC43A3Q8NBI5 491 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 NSUN7Q8NE18 718 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 COPS5Q92905 334 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 LBHD1Q9BQE6 289 aaPredicted RBP15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 SDF4Q9BRK5 362 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 ALG1Q9BT22 464 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 RTEL1Q9NZ71 1219 aa15.95■□□□□ 0.14
SNRPA1-216ENST00000626000 NFASCO94856 1347 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 MYH7BA7E2Y1 1941 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 MEIS1O00470 390 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 CIITAP33076 1130 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 CDK7P50613 346 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 TLE2Q04725 743 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 MOXD1Q6UVY6 613 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 CRYGNQ8WXF5 182 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 TNPO1Q92973 898 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 TMEM260Q9NX78 707 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 ZNF215Q9UL58 517 aaPredicted RBP15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 SCN10AQ9Y5Y9 1956 aa15.94■□□□□ 0.14
SNRPA1-216ENST00000626000 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
SNRPA1-216ENST00000626000 PQBP1O60828 265 aaKnown RBP15.93■□□□□ 0.14
SNRPA1-216ENST00000626000 LARGE1O95461 756 aa15.93■□□□□ 0.14
SNRPA1-216ENST00000626000 CTDNEP1O95476 244 aa15.93■□□□□ 0.14
SNRPA1-216ENST00000626000 F2P00734 622 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms