RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 CUL4BQ13620 913 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 KRT31Q15323 416 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 LGSNQ5TDP6 509 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 KAZNQ674X7 775 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 ARHGEF1Q92888 912 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 YY1AP1Q9H869 796 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 GNGT1P63211 74 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 HADHQ16836 314 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 ATG9AQ7Z3C6 839 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 RNF168Q8IYW5 571 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF148Q9UQR1 794 aa13.64□□□□□ -0.23
TNFAIP3-206ENST00000612899 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF131P52739 623 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 SMIM5Q71RC9 77 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 KSR1Q8IVT5 923 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 CPDO75976 1380 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 POTEMA6NI47 508 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 STX2P32856 288 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 PIK3CAP42336 1068 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 MAGOHBQ96A72 148 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 TDRD3Q9H7E2 651 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 SPC25Q9HBM1 224 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 PLCB1Q9NQ66 1216 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 CCDC160A6NGH7 325 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 GFPT2O94808 682 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 MFAP3P55082 362 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 SESTD1Q86VW0 696 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 STMN2Q93045 179 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 GEMIN8Q9NWZ8 242 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 SLC5A4Q9NY91 659 aa13.63□□□□□ -0.23
TNFAIP3-206ENST00000612899 SFI1A8K8P3 1242 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L15C9J2P7 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L13C9JLJ4 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L11C9JVI0 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L18D6R9N7 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L22D6RA61 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L17D6RBQ6 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L19D6RCP7 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L20D6RJB6 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 RNF8O76064 485 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 NDUFA10O95299 355 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 LMNB1P20700 586 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L24Q0WX57 530 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 CTTNQ14247 550 aaKnown RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 KRT81Q14533 505 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 PALM2Q8IXS6 379 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 MASTLQ96GX5 879 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 GCNT4Q9P109 453 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 CAPN9O14815 690 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 FTCDO95954 541 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 PPP2R5CQ13362 524 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 TMEM179Q6ZVK1 233 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 CEP95Q96GE4 821 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 RIOK1Q9BRS2 568 aaKnown RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 UNC13BO14795 1591 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 STAM2O75886 525 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 MAN1A1P33908 653 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 USP14P54578 494 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 FAM160B1Q5W0V3 765 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 PPFIBP2Q8ND30 876 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 ACCSQ96QU6 501 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 RIPOR2Q9Y4F9 1068 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 CNGA1P29973 690 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 TCP11X2Q5H9J9 407 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 TBC1D31Q96DN5 1066 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 FAM84BQ96KN1 310 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
TNFAIP3-206ENST00000612899 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ALX1Q15699 326 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 BCAS4Q8TDM0 211 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 ZNF653Q96CK0 615 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 NHEJ1Q9H9Q4 299 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 MED14O60244 1454 aa13.61□□□□□ -0.23
TNFAIP3-206ENST00000612899 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms