RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 BLOC1S4Q9NUP1 217 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 CAPN7Q9Y6W3 813 aa24.66■■□□□ 1.54
SHANK2-220ENST00000608988 MYMKA6NI61 221 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 EVX2Q03828 476 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 CLEC4GQ6UXB4 293 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 ZNF473Q8WTR7 871 aaKnown RBP24.65■■□□□ 1.54
SHANK2-220ENST00000608988 CEP63Q96MT8 703 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 SMARCAL1Q9NZC9 954 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 ATP6V0A2Q9Y487 856 aa24.65■■□□□ 1.54
SHANK2-220ENST00000608988 GOLGA6L10A6NI86 522 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 FAM107AO95990 144 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 TECP42680 631 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 MNAT1P51948 309 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 PDIA5Q14554 519 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 TDRD12Q587J7 1177 aaKnown RBP24.64■■□□□ 1.54
SHANK2-220ENST00000608988 SOGA3Q5TF21 947 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 CASKIN2Q8WXE0 1202 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 PSMB7Q99436 277 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 EHD2Q9NZN4 543 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 DOT1LQ8TEK3 1739 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 ATP8B3O60423 1300 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 MYH10P35580 1976 aa24.64■■□□□ 1.54
SHANK2-220ENST00000608988 RGL2O15211 777 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 PALMO75781 387 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 KRT14P02533 472 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 SLC18A3Q16572 532 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 FBXW10Q5XX13 1052 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 CDK5RAP3Q96JB5 506 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 MTMR9Q96QG7 549 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 ANKRD2Q9GZV1 360 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 ISCUQ9H1K1 167 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 ZNF287Q9HBT7 754 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 TMEM59LQ9UK28 342 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 COL4A3BPQ9Y5P4 624 aa24.64■■□□□ 1.53
SHANK2-220ENST00000608988 SMCO2A6NFE2 343 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 HIBADHP31937 336 aaKnown RBP24.63■■□□□ 1.53
SHANK2-220ENST00000608988 ATP1A2P50993 1020 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 FKBP3Q00688 224 aaKnown RBP24.63■■□□□ 1.53
SHANK2-220ENST00000608988 NLRP14Q86W24 1093 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 SH2D3CQ8N5H7 860 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 RAD54LQ92698 747 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 MS4A14Q96JA4 679 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 HINFPQ9BQA5 517 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 TAF1DQ9H5J8 278 aaPredicted RBP24.63■■□□□ 1.53
SHANK2-220ENST00000608988 MKNK2Q9HBH9 465 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 TMBIM4Q9HC24 238 aa24.63■■□□□ 1.53
SHANK2-220ENST00000608988 H0YHG0 523 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 NKRFO15226 690 aaKnown RBP eCLIP24.62■■□□□ 1.537e-7■■■□□ 18.4
SHANK2-220ENST00000608988 BUB1O43683 1085 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 FAM153BP0C7A2 387 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 TSPY3P0CV98 308 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 TSPY8P0CW00 308 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 MARSP56192 900 aaKnown RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 KCNMA1Q12791 1236 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ITGB3BPQ13352 177 aaPredicted RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 BIRC3Q13489 604 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 IFI16Q16666 785 aaKnown RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 FAM153CQ494X1 144 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 TTC19Q6DKK2 380 aaPredicted RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 USP38Q8NB14 1042 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 MYCBPAPQ8TBZ2 947 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 IFT81Q8WYA0 676 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 TAF4BQ92750 862 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 LRRC45Q96CN5 670 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 PBKQ96KB5 322 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 PNMA5Q96PV4 448 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ATAD5Q96QE3 1844 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ACTR5Q9H9F9 607 aaPredicted RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 FAM153AQ9UHL3 310 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 WNK3Q9BYP7 1800 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 KLRF2D3W0D1 207 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 USP17L8P0C7I0 530 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ZCWPW2Q504Y3 356 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 FAM83BQ5T0W9 1011 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 MYOCDQ8IZQ8 938 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ZNF444Q8N0Y2 327 aaPredicted RBP24.62■■□□□ 1.53
SHANK2-220ENST00000608988 ANKRD13CQ8N6S4 541 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 CCT8L2Q96SF2 557 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 TMEM47Q9BQJ4 181 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 AIPL1Q9NZN9 384 aa24.62■■□□□ 1.53
SHANK2-220ENST00000608988 COL14A1Q05707 1796 aaKnown RBP24.61■■□□□ 1.53
SHANK2-220ENST00000608988 TMEM119Q4V9L6 283 aa24.61■■□□□ 1.53
SHANK2-220ENST00000608988 KCTD16Q68DU8 428 aa24.61■■□□□ 1.53
SHANK2-220ENST00000608988 CALR3Q96L12 384 aaKnown RBP24.61■■□□□ 1.53
SHANK2-220ENST00000608988 KRT12Q99456 494 aa24.61■■□□□ 1.53
SHANK2-220ENST00000608988 VCPKMTQ9H867 229 aa24.61■■□□□ 1.53
SHANK2-220ENST00000608988 BHMG1C9JSJ3 638 aaPredicted RBP24.6■■□□□ 1.53
SHANK2-220ENST00000608988 ANXA13P27216 316 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 SMTNP53814 917 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 MRPS25P82663 173 aaKnown RBP24.6■■□□□ 1.53
SHANK2-220ENST00000608988 ACTN3Q08043 901 aaPredicted RBP24.6■■□□□ 1.53
SHANK2-220ENST00000608988 CALCRLQ16602 461 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 RUFY4Q6ZNE9 571 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 HPS3Q969F9 1004 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 SEC63Q9UGP8 760 aaKnown RBP24.6■■□□□ 1.53
SHANK2-220ENST00000608988 ROBO1Q9Y6N7 1651 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 SLC26A4O43511 780 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 MTMR3Q13615 1198 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 SLC10A5Q5PT55 438 aa24.6■■□□□ 1.53
SHANK2-220ENST00000608988 CERS3Q8IU89 383 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms