RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 YAF2Q8IY57 180 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 KRT222Q8N1A0 295 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
SHANK2-219ENST00000606715 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 CNTNAP4Q9C0A0 1308 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 MAP7D3Q8IWC1 876 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 CEP170P1Q96L14 293 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 STRBPQ96SI9 672 aaKnown RBP12.02□□□□□ -0.49
SHANK2-219ENST00000606715 LRRC4Q9HBW1 653 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 WDR19Q8NEZ3 1342 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 RECQLP46063 649 aaPredicted RBP12.02□□□□□ -0.49
SHANK2-219ENST00000606715 NFIXQ14938 502 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 MICALL1Q8N3F8 863 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 FAM81BQ96LP2 452 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 KRT12Q99456 494 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 PUS7LQ9H0K6 701 aaKnown RBP12.02□□□□□ -0.49
SHANK2-219ENST00000606715 RIC8AQ9NPQ8 531 aa12.02□□□□□ -0.49
SHANK2-219ENST00000606715 PIH1D3Q9NQM4 214 aaKnown RBP12.02□□□□□ -0.49
SHANK2-219ENST00000606715 CLGNO14967 610 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 PFKFB1P16118 471 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 CEP85LQ5SZL2 805 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 FAM173BQ6P4H8 233 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 NDUFAF2Q8N183 169 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 PPFIBP2Q8ND30 876 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 STAMQ92783 540 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 KMT5AQ9NQR1 393 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 CPDO75976 1380 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 HMGB1P1B2RPK0 211 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 NEDD9Q14511 834 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 MYLK4Q86YV6 388 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 C7orf31Q8N865 590 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 URGCPQ8TCY9 931 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 SLC38A10Q9HBR0 1119 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 AP3B2Q13367 1082 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 RPS6KA1Q15418 735 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-219ENST00000606715 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 PSAPP07602 524 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 SCRN1Q12765 414 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 GBP6Q6ZN66 633 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 SIX6OS1Q8N1H7 587 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 ITM2BQ9Y287 266 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 PCDHB4Q9Y5E5 795 aa12.01□□□□□ -0.49
SHANK2-219ENST00000606715 KCNQ2O43526 872 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ABCB4P21439 1286 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 MCAMP43121 646 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 SEPT2Q15019 361 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 FAM26FQ5R3K3 315 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 RRAGAQ7L523 313 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 FAM207AQ9NSI2 230 aaPredicted RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 ZNF445P59923 1031 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 PTGDRQ13258 359 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 MTERF2Q49AM1 385 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 STYK1Q6J9G0 422 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ZBTB9Q96C00 473 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 HDAC11Q96DB2 347 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ALX1Q15699 326 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 KLHL7Q8IXQ5 586 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 P3H4Q92791 437 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 USP28Q96RU2 1077 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 MROH7-TTC4A0A0A0MT08 1334 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 MARK3P27448 753 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 NSFP46459 744 aaKnown RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 TFAMQ00059 246 aaKnown RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ARMCX2Q7L311 632 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ABCF3Q9NUQ8 709 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 CIITAP33076 1130 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 SLC39A14Q15043 492 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 SLC15A2Q16348 729 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 ZNF589Q86UQ0 364 aaPredicted RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 PSPC1Q8WXF1 523 aaKnown RBP12□□□□□ -0.49
SHANK2-219ENST00000606715 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 POLR3EQ9NVU0 708 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 AMFRQ9UKV5 643 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 BAG5Q9UL15 447 aa12□□□□□ -0.49
SHANK2-219ENST00000606715 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
SHANK2-219ENST00000606715 USP17L5A8MUK1 530 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms