RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	EPB41L5	Q9HCM4	733 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	TMOD3	Q9NYL9	352 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	TRIM10	Q9UDY6	481 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	SUFU	Q9UMX1	484 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	RPL26L1	Q9UNX3	145 aa	Known RBP	12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	GDA	Q9Y2T3	454 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	ROBO3	Q96MS0	1386 aa		12.91	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	C10orf71	Q711Q0	1435 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	LAMB2	P55268	1798 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	RCCD1	A6NED2	376 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	FAM187A	A6NFU0	413 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	RASSF10	A6NK89	507 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236		E7ENQ6	273 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236		E7EVH7	732 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	PGRMC1	O00264	195 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	FLOT1	O75955	427 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	CYP7A1	P22680	504 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	SKIV2L2	P42285	1042 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	MKRN3	Q13064	507 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	GRM4	Q14833	912 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	PTPN21	Q16825	1174 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	EDRF1	Q3B7T1	1238 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	ANKRD20A8P	Q5CZ79	823 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	FBXW10	Q5XX13	1052 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	PPP1R18	Q6NYC8	613 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	CADPS2	Q86UW7	1296 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	RASGEF1C	Q8N431	466 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	GPATCH11	Q8N954	259 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	RBM33	Q96EV2	1170 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	FAM89A	Q96GI7	184 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	IFT74	Q96LB3	600 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	ORAI2	Q96SN7	254 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	JPH2	Q9BR39	696 aa	Predicted RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	ZMYND12	Q9H0C1	365 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	C6orf50	Q9HD87	102 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	BARHL2	Q9NY43	387 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	CTNNAL1	Q9UBT7	734 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	TRMT112	Q9UI30	125 aa	Known RBP	12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	TAOK2	Q9UL54	1235 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	CAPN6	Q9Y6Q1	641 aa		12.9	□□□□□ -0.34
U2AF1L4-221	ENST00000601236	SPATA31A3	Q5VYP0	1347 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	KDM3A	Q9Y4C1	1321 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CIC	Q96RK0	1608 aa	Predicted RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZNF263	O14978	683 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GGPS1	O95749	300 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ATF3	P18847	181 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ATP5D	P30049	168 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PRKCI	P41743	596 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CEBPA	P49715	358 aa	Predicted RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ASIC1	P78348	528 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GUCY2D	Q02846	1103 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	DHX34	Q14147	1143 aa	Known RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NONO	Q15233	471 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CMPK2	Q5EBM0	449 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RNF187	Q5TA31	235 aa	Predicted RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ANKRD40	Q6AI12	368 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TYW1B	Q6NUM6	668 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PI16	Q6UXB8	463 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TSEN2	Q8NCE0	465 aa	Known RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CCDC197	Q8NCU1	140 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	BANK1	Q8NDB2	785 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MORC4	Q8TE76	937 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CHMP6	Q96FZ7	201 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	12.89	□□□□□ -0.35	7e-9	■■■■■ 31.8
U2AF1L4-221	ENST00000601236	NT5C3A	Q9H0P0	336 aa		12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RBM12	Q9NTZ6	932 aa	Known RBP	12.89	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	GTPBP10	A4D1E9	387 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236		H0YGN5	161 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236		O00370	1275 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZNF185	O15231	689 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MOCS3	O95396	460 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CTNNA1	P35221	906 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ZC3H6	P61129	1189 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	IFT88	Q13099	833 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	IL17A	Q16552	155 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CAVIN4	Q5BKX8	364 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	C6orf118	Q5T5N4	469 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	HGSNAT	Q68CP4	663 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	MSL1	Q68DK7	614 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	LMOD2	Q6P5Q4	547 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	CEP128	Q6ZU80	1094 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TAOK1	Q7L7X3	1001 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	DZIP3	Q86Y13	1208 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	STAG2	Q8N3U4	1231 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SRBD1	Q8N5C6	995 aa	Known RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PIK3R5	Q8WYR1	880 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	DDX12P	Q92771	950 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	SEC16B	Q96JE7	1060 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PSMD1	Q99460	953 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	TRIM6	Q9C030	488 aa	Predicted RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	EBF2	Q9HAK2	575 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	RASAL2	Q9UJF2	1139 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	NFU1	Q9UMS0	254 aa		12.88	□□□□□ -0.35
U2AF1L4-221	ENST00000601236	PLAA	Q9Y263	795 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms