RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
CCDC9-203ENST00000596938 SPATA33Q96N06 139 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 SENP7Q9BQF6 1050 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 UMODL1Q5DID0 1318 aa12.1□□□□□ -0.47
CCDC9-203ENST00000596938 COL6A3P12111 3177 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 hCG_1984214I3L0E3 225 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 FIBPO43427 364 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 F2P00734 622 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 FGBP02675 491 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 CPA1P15085 419 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
CCDC9-203ENST00000596938 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 CDC27P30260 824 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 CCL23P55773 120 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 EVCP57679 992 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 Q6ZUG5 572 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 ZNF713Q8N859 430 aaPredicted RBP12.09□□□□□ -0.47
CCDC9-203ENST00000596938 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.47
CCDC9-203ENST00000596938 KATNAL1Q9BW62 490 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 WNT8AQ9H1J5 351 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 LTBP2Q14767 1821 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 CNTNAP5Q8WYK1 1306 aa12.09□□□□□ -0.47
CCDC9-203ENST00000596938 MAFGO15525 162 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PFKMP08237 780 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 ACRP10323 421 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 RFC2P35250 354 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PSEN2P49810 448 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 BFSP2Q13515 415 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 MFSD10Q14728 455 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PTGISQ16647 500 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 GDF6Q6KF10 455 aaPredicted RBP12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 METTL7BQ6UX53 244 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 C7orf31Q8N865 590 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 RETREG2Q8NC44 543 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
CCDC9-203ENST00000596938 BRF1Q92994 677 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 VWCEQ96DN2 955 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 GLT8D2Q9H1C3 349 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 RIC8AQ9NPQ8 531 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 BARHL2Q9NY43 387 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 GTF2IRD1Q9UHL9 959 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PCDHA6Q9UN73 950 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 STXBP5LQ9Y2K9 1186 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 PCDHA8Q9Y5H6 950 aa12.08□□□□□ -0.48
CCDC9-203ENST00000596938 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 SPDYE3A6NKU9 549 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
CCDC9-203ENST00000596938 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC9-203ENST00000596938 NAPAP54920 295 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 CHMP4BP1P59074 171 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 UBE2SQ16763 222 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 ZNF697Q5TEC3 545 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 RUFY3Q7L099 469 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 CAGE1Q8TC20 777 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 PPP1R13LQ8WUF5 828 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 GPRASP2Q96D09 838 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 CTAGE1Q96RT6 745 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 C16orf70Q9BSU1 422 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 TM6SF1Q9BZW5 370 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 MTIF3Q9H2K0 278 aaKnown RBP12.07□□□□□ -0.48
CCDC9-203ENST00000596938 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 HDAC6Q9UBN7 1215 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 UBIAD1Q9Y5Z9 338 aa12.07□□□□□ -0.48
CCDC9-203ENST00000596938 SMCO2A6NFE2 343 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 H3BRB1 525 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 STXBP3O00186 592 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 NOP56O00567 594 aaKnown RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 SORBS3O60504 671 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 CENPBP07199 599 aaPredicted RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 ITGB5P18084 799 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 RBL2Q08999 1139 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 CCDC155Q8N6L0 562 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 SCLYQ96I15 445 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 GPR20Q99678 358 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 ALG1Q9BT22 464 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms