RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, human

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-208	ENST00000592052	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	28.14	■■■□□ 2.1
TMEM259-208	ENST00000592052	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	MSC	O60682	206 aa		28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	TDP2	O95551	362 aa		28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	ZSCAN22	P10073	491 aa	Predicted RBP	28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	DUSP28	Q4G0W2	176 aa		28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	CCDC62	Q6P9F0	684 aa		28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	KCNH7	Q9NS40	1196 aa		28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	DDX20	Q9UHI6	824 aa	Known RBP	28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	DDX25	Q9UHL0	483 aa	Known RBP	28.14	■■■□□ 2.09
TMEM259-208	ENST00000592052	SMPD1	P17405	629 aa		28.13	■■■□□ 2.09
TMEM259-208	ENST00000592052	ATP2B1	P20020	1258 aa		28.13	■■■□□ 2.09
TMEM259-208	ENST00000592052	MBOAT7	Q96N66	472 aa		28.13	■■■□□ 2.09
TMEM259-208	ENST00000592052	PAK6	Q9NQU5	681 aa	Predicted RBP	28.13	■■■□□ 2.09
TMEM259-208	ENST00000592052	DDX41	Q9UJV9	622 aa	Known RBP	28.13	■■■□□ 2.09
TMEM259-208	ENST00000592052	ARIH2	O95376	493 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	REST	Q13127	1097 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	SEMA3F	Q13275	785 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	PKP1	Q13835	747 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	LY6K	Q17RY6	165 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052		Q4G0T1	1027 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	RILPL1	Q5EBL4	403 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	KIAA1217	Q5T5P2	1943 aa		28.12	■■■□□ 2.09
TMEM259-208	ENST00000592052	NKRF	O15226	690 aa	Known RBP eCLIP	28.11	■■■□□ 2.09	2e-7	■□□□□ 10.4
TMEM259-208	ENST00000592052	AR	P10275	920 aa		28.11	■■■□□ 2.09
TMEM259-208	ENST00000592052	RARB	P10826	455 aa		28.11	■■■□□ 2.09
TMEM259-208	ENST00000592052	LENG9	Q96B70	501 aa		28.11	■■■□□ 2.09
TMEM259-208	ENST00000592052	IPO9	Q96P70	1041 aa	Known RBP	28.11	■■■□□ 2.09
TMEM259-208	ENST00000592052	ADCY6	O43306	1168 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	DUSP11	O75319	330 aa	Known RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	TTC38	Q5R3I4	469 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	SENP7	Q9BQF6	1050 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	TOB1	P50616	345 aa	Predicted RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	SP2	Q02086	613 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	TMEM63B	Q5T3F8	832 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	FOXD4L5	Q5VV16	416 aa	Predicted RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	ANO1	Q5XXA6	986 aa		28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	LENG1	Q96BZ8	264 aa	Predicted RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	AGO4	Q9HCK5	861 aa	Known RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	GNE	Q9Y223	722 aa	Known RBP	28.1	■■■□□ 2.09
TMEM259-208	ENST00000592052	WNT7A	O00755	349 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	SLC37A4	O43826	429 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	UBA1	P22314	1058 aa	Known RBP	28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	DDIT3	P35638	169 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	NEDD9	Q14511	834 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	MYSM1	Q5VVJ2	828 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	GIMAP8	Q8ND71	665 aa	Predicted RBP	28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052		Q9Y3F1	56 aa		28.09	■■■□□ 2.09
TMEM259-208	ENST00000592052	BRD1	O95696	1058 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	F13A1	P00488	732 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	MCM7	P33993	719 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	ORC2	Q13416	577 aa	Predicted RBP	28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	GJC2	Q5T442	439 aa	Predicted RBP	28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	LHX8	Q68G74	356 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	DEFB118	Q96PH6	123 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	ZNF577	Q9BSK1	485 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	PKD2L1	Q9P0L9	805 aa		28.08	■■■□□ 2.09
TMEM259-208	ENST00000592052	IPO5	O00410	1097 aa	Known RBP	28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	NEMF	O60524	1076 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	ATP9A	O75110	1047 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	GH1	P01241	217 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	KCNA2	P16389	499 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	TLK2	Q86UE8	772 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	DHX37	Q8IY37	1157 aa	Known RBP	28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	COPS5	Q92905	334 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	TMEM106C	Q9BVX2	250 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	AP5M1	Q9H0R1	490 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	XPNPEP3	Q9NQH7	507 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	MSH4	O15457	936 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	GGPS1	O95749	300 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	GJB1	P08034	283 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	NBR1	Q14596	966 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	ZNF174	Q15697	407 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	CELF3	Q5SZQ8	465 aa	Known RBP	28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	SPC25	Q9HBM1	224 aa		28.07	■■■□□ 2.08
TMEM259-208	ENST00000592052	DYNC1LI2	O43237	492 aa	Predicted RBP	28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	NUCB2	P80303	420 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	POTED	Q86YR6	584 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	OR6J1	Q8NGC5	347 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	SDF4	Q9BRK5	362 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	MLXIP	Q9HAP2	919 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	PCDHB6	Q9Y5E3	794 aa		28.06	■■■□□ 2.08
TMEM259-208	ENST00000592052	PTGS1	P23219	599 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	ARHGAP1	Q07960	439 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	ITGB3BP	Q13352	177 aa	Predicted RBP	28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	LAMC2	Q13753	1193 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	CYFIP1	Q7L576	1253 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	ETNPPL	Q8TBG4	499 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	EMID1	Q96A84	441 aa	Predicted RBP	28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	UIMC1	Q96RL1	719 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	KCNMB3	Q9NPA1	279 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	TBC1D22B	Q9NU19	505 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	ZDHHC9	Q9Y397	364 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	NFASC	O94856	1347 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	SYNRG	Q9UMZ2	1314 aa		28.05	■■■□□ 2.08
TMEM259-208	ENST00000592052	TBX3	O15119	743 aa		28.04	■■■□□ 2.08
TMEM259-208	ENST00000592052	MARCH6	O60337	910 aa		28.04	■■■□□ 2.08
TMEM259-208	ENST00000592052	METTL7B	Q6UX53	244 aa		28.04	■■■□□ 2.08
TMEM259-208	ENST00000592052	FAM20A	Q96MK3	541 aa		28.04	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms