RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 PEX10O60683 326 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ITGB5P18084 799 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CASP1P29466 404 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 COPB2P35606 906 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CUL4BQ13620 913 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 MORC3Q14149 939 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 IQCB1Q15051 598 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 HYIQ5T013 277 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 XRRA1Q6P2D8 792 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 LUZP1Q86V48 1076 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ERMNQ8TAM6 284 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 GTF3C2Q8WUA4 911 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 STAMQ92783 540 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 NT5C3AQ9H0P0 336 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 PFASO15067 1338 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 PSMD10O75832 226 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 SLC25A27O95847 323 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ARP10275 920 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CCND2P30279 289 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 CCL15Q16663 113 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 LRCH2Q5VUJ6 765 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ISM2Q6H9L7 571 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 LARP4BQ92615 738 aaKnown RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 RAD54LQ92698 747 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 ZNF577Q9BSK1 485 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 MOV10L1Q9BXT6 1211 aaKnown RBP12.81□□□□□ -0.36
SMAD4-205ENST00000588745 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 BLOC1S4Q9NUP1 217 aa12.81□□□□□ -0.36
SMAD4-205ENST00000588745 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 GAS7O60861 476 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
SMAD4-205ENST00000588745 BMP6P22004 513 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
SMAD4-205ENST00000588745 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 ECM1Q16610 540 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 CST9Q5W186 159 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMAD4-205ENST00000588745 ANKRD23Q86SG2 305 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 NCAPG2Q86XI2 1143 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 DHX40Q8IX18 779 aaKnown RBP12.8□□□□□ -0.36
SMAD4-205ENST00000588745 ANKRD35Q8N283 1001 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 AOPEPQ8N6M6 819 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
SMAD4-205ENST00000588745 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 RIT2Q99578 217 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 WDR11Q9BZH6 1224 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 TXNRD2Q9NNW7 524 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 KCNH7Q9NS40 1196 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 RMND1Q9NWS8 449 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 RBPJLQ9UBG7 517 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 LRRC37A2A6NM11 1700 aa12.8□□□□□ -0.36
SMAD4-205ENST00000588745 BECN2A8MW95 431 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 BTBD19C9JJ37 291 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 PDHXO00330 501 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 IPO5O00410 1097 aaKnown RBP12.79□□□□□ -0.36
SMAD4-205ENST00000588745 MED24O75448 989 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
SMAD4-205ENST00000588745 NR3C2P08235 984 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 ERCC3P19447 782 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 HUNKP57058 714 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 AMPD3Q01432 767 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 CCDC173Q0VFZ6 552 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 MTMR1Q13613 665 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 B3GNT9Q6UX72 402 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 SV2BQ7L1I2 683 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 MLKLQ8NB16 471 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 TRIM9Q9C026 710 aa12.79□□□□□ -0.36
SMAD4-205ENST00000588745 AGO4Q9HCK5 861 aaKnown RBP12.79□□□□□ -0.36
SMAD4-205ENST00000588745 EML1O00423 815 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 CHMP2AO43633 222 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 KLRC4O43908 158 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 CYP2C8P10632 490 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 RPA1P27694 616 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
SMAD4-205ENST00000588745 ERVK-24P63145 666 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms