RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 PPTC7Q8NI37 304 aa21.89■■□□□ 1.09
TPM4-204ENST00000586499 INPP4AQ96PE3 977 aaPredicted RBP21.89■■□□□ 1.09
TPM4-204ENST00000586499 LARP6Q9BRS8 491 aaKnown RBP21.89■■□□□ 1.09
TPM4-204ENST00000586499 UPF3BQ9BZI7 483 aaKnown RBP21.89■■□□□ 1.09
TPM4-204ENST00000586499 HIPK3Q9H422 1215 aa21.89■■□□□ 1.09
TPM4-204ENST00000586499 SPATA31C2B4DYI2 1134 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 STXBP3O00186 592 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 ACRP10323 421 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 TGFB3P10600 412 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 TOB2Q14106 344 aaPredicted RBP21.88■■□□□ 1.09
TPM4-204ENST00000586499 NFRKBQ6P4R8 1299 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 SPATA33Q96N06 139 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 NOC4LQ9BVI4 516 aaKnown RBP21.88■■□□□ 1.09
TPM4-204ENST00000586499 PCDHA6Q9UN73 950 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 PCDHA8Q9Y5H6 950 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 CYP46A1Q9Y6A2 500 aa21.88■■□□□ 1.09
TPM4-204ENST00000586499 STAM2O75886 525 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 ZNF286BP0CG31 522 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 PDIA3P30101 505 aaKnown RBP21.87■■□□□ 1.09
TPM4-204ENST00000586499 ICAM3P32942 547 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 CCL23P55773 120 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 CCT2P78371 535 aaKnown RBP21.87■■□□□ 1.09
TPM4-204ENST00000586499 GNPTABQ3T906 1256 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 TMEM199Q8N511 208 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 MLXIPQ9HAP2 919 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 TELO2Q9Y4R8 837 aa21.87■■□□□ 1.09
TPM4-204ENST00000586499 CCDC196A0A1B0GTZ2 297 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 SPDYE3A6NKU9 549 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 PHKBQ93100 1093 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 PGBD1Q96JS3 809 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.86■■□□□ 1.092e-12■■□□□ 13.8
TPM4-204ENST00000586499 ALG1Q9BT22 464 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 TM6SF1Q9BZW5 370 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 WNT8AQ9H1J5 351 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 NCOA5Q9HCD5 579 aaKnown RBP21.86■■□□□ 1.09
TPM4-204ENST00000586499 RIC8AQ9NPQ8 531 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
TPM4-204ENST00000586499 SMCO2A6NFE2 343 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 FIBPO43427 364 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 SUPT20HL2P0C7V6 817 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 PSEN2P49810 448 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 EVCP57679 992 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 PPIGQ13427 754 aaKnown RBP eCLIP21.85■■□□□ 1.09
TPM4-204ENST00000586499 NTRK3Q16288 839 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 PFKFB3Q16875 520 aaPredicted RBP21.85■■□□□ 1.09
TPM4-204ENST00000586499 XRRA1Q6P2D8 792 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 Q7L0L9 218 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 CYFIP1Q7L576 1253 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 RNPC3Q96LT9 517 aaKnown RBP21.85■■□□□ 1.09
TPM4-204ENST00000586499 TMEM260Q9NX78 707 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 NID2Q14112 1375 aa21.85■■□□□ 1.09
TPM4-204ENST00000586499 DOCK5Q9H7D0 1870 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 ADAMTS3O15072 1205 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 PPFIA4O75335 1185 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 HOXD8P13378 290 aaPredicted RBP21.84■■□□□ 1.09
TPM4-204ENST00000586499 ITGB5P18084 799 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 ADCY7P51828 1080 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 PTPN11Q06124 597 aaPredicted RBP21.84■■□□□ 1.09
TPM4-204ENST00000586499 MFSD10Q14728 455 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 PKN1Q16512 942 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 TMEM240Q5SV17 173 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 GDF6Q6KF10 455 aaPredicted RBP21.84■■□□□ 1.09
TPM4-204ENST00000586499 PPP1R18Q6NYC8 613 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 SCLYQ96I15 445 aa21.84■■□□□ 1.09
TPM4-204ENST00000586499 PRPF3O43395 683 aaKnown RBP21.83■■□□□ 1.09
TPM4-204ENST00000586499 ATP9AO75110 1047 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 F2P00734 622 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 SCG2P13521 617 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 NEDD9Q14511 834 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 PTGISQ16647 500 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 ZNF365Q70YC5 407 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 NLRX1Q86UT6 975 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 CTAGE1Q96RT6 745 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 C16orf70Q9BSU1 422 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 HDAC6Q9UBN7 1215 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 UBIAD1Q9Y5Z9 338 aa21.83■■□□□ 1.09
TPM4-204ENST00000586499 hCG_1984214I3L0E3 225 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 HAS3O00219 553 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 SP4Q02446 784 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 METTL7BQ6UX53 244 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 ZNF713Q8N859 430 aaPredicted RBP21.82■■□□□ 1.08
TPM4-204ENST00000586499 SLC26A6Q9BXS9 759 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 IL23AQ9NPF7 189 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 PDRG1Q9NUG6 133 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 PKD2L1Q9P0L9 805 aa21.82■■□□□ 1.08
TPM4-204ENST00000586499 NOP56O00567 594 aaKnown RBP21.81■■□□□ 1.08
TPM4-204ENST00000586499 STK3Q13188 491 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 HIC1Q14526 733 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 GPR153Q6NV75 609 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 SESTD1Q86VW0 696 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 DEFB123Q8N688 67 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 C7orf31Q8N865 590 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 CYP2W1Q8TAV3 490 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 GPRASP2Q96D09 838 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 VWCEQ96DN2 955 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 GPR20Q99678 358 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 KATNAL1Q9BW62 490 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 ANO3Q9BYT9 981 aa21.81■■□□□ 1.08
TPM4-204ENST00000586499 GTF2IRD1Q9UHL9 959 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms