RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 MAN2A1Q16706 1144 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 TRAPPC11Q7Z392 1133 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 RHOXF2Q9BQY4 288 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 ANKRD31Q8N7Z5 1873 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 CACNB3P54284 484 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 CDK17Q00537 523 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 TCP10Q12799 353 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 LRRC41Q15345 812 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 GLIS3Q8NEA6 775 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 HNRNPLLQ8WVV9 542 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 CCDC42Q96M95 316 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 LACRTQ9GZZ8 138 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 DBNDD1Q9H9R9 158 aa14.66□□□□□ -0.06
CSNK1D-222ENST00000584377 ABCB11O95342 1321 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 RCCD1A6NED2 376 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L15C9J2P7 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L13C9JLJ4 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L11C9JVI0 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L18D6R9N7 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L22D6RA61 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L17D6RBQ6 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L19D6RCP7 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L20D6RJB6 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 HOXA7P31268 230 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 SLC1A4P43007 532 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 CYP27A1Q02318 531 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L24Q0WX57 530 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 QRICH1Q2TAL8 776 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 PPM1EQ8WY54 764 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 TSG101Q99816 390 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 HDAC6Q9UBN7 1215 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 SIK3Q9Y2K2 1263 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 PCDHA1Q9Y5I3 950 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 ADAMTSL1Q8N6G6 1762 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 ATP1A1P05023 1023 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 SSBP05455 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 PDE6BP35913 854 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 LRRC55Q6ZSA7 311 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 KIAA0825Q8IV33 1275 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 DNAJC19Q96DA6 116 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 GLT8D2Q9H1C3 349 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 MMRN2Q9H8L6 949 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 KCNQ5Q9NR82 932 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 VPS18Q9P253 973 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 PLAGL2Q9UPG8 496 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 SAR1BQ9Y6B6 198 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 KDM3AQ9Y4C1 1321 aa14.65□□□□□ -0.06
CSNK1D-222ENST00000584377 ERLIN1O75477 346 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 COASYQ13057 564 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 SEPT2Q15019 361 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 MYOCDQ8IZQ8 938 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 NOA1Q8NC60 698 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 EPHB6O15197 1021 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 RPS6KA5O75582 802 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 ERCC3P19447 782 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 HNRNPH3P31942 346 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 SPA17Q15506 151 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 SHROOM1Q2M3G4 852 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 CERKLQ49MI3 558 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 BEND6Q5SZJ8 279 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 C2CD5Q86YS7 1000 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 PCDHAC2Q9Y5I4 1007 aa14.64□□□□□ -0.07
CSNK1D-222ENST00000584377 PLEKP08567 350 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 RBM5P52756 815 aaKnown RBP eCLIP14.63□□□□□ -0.071e-8■■□□□ 12.4
CSNK1D-222ENST00000584377 KIF5AQ12840 1032 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 CDC37Q16543 378 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 PAPD7Q5XG87 772 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 SLFN13Q68D06 897 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 COL23A1Q86Y22 540 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 PANK4Q9NVE7 773 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 KIAA1024Q9UPX6 916 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 MYH4Q9Y623 1939 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 MYH7BA7E2Y1 1941 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 GREB1LQ9C091 1923 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 DDTLA6NHG4 134 aaPredicted RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 MAP2K7O14733 419 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 BRD2P25440 801 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 HMGB2P26583 209 aaKnown RBP14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 VAV2P52735 878 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 CORO7P57737 925 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 VSNL1P62760 191 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 FAM26FQ5R3K3 315 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 HYIQ5T013 277 aa14.63□□□□□ -0.07
CSNK1D-222ENST00000584377 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms