RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SMCO2A6NFE2 343 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 SUPT20HL2P0C7V6 817 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 CYP2C9P11712 490 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 ADCY7P51828 1080 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 CCL23P55773 120 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 AKAP17AQ02040 695 aaKnown RBP19.08■□□□□ 0.64
SREBF1-219ENST00000580540 TYW1BQ6NUM6 668 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 NFRKBQ6P4R8 1299 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 NLRX1Q86UT6 975 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 PPTC7Q8NI37 304 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 ALG1Q9BT22 464 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 AGXT2Q9BYV1 514 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 NOD1Q9Y239 953 aa19.08■□□□□ 0.64
SREBF1-219ENST00000580540 UMODL1Q5DID0 1318 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 SPATA31C2B4DYI2 1134 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 STXBP3O00186 592 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 FIBPO43427 364 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 ZNF286BP0CG31 522 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 ACRP10323 421 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 CSF2RAP15509 400 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 PDIA3P30101 505 aaKnown RBP19.07■□□□□ 0.64
SREBF1-219ENST00000580540 PPIGQ13427 754 aaKnown RBP eCLIP19.07■□□□□ 0.646e-7■□□□□ 11
SREBF1-219ENST00000580540 HSDL1Q3SXM5 330 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 XRRA1Q6P2D8 792 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 FBXL16Q8N461 479 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 KAT2BQ92831 832 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 PHKBQ93100 1093 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 PGBD1Q96JS3 809 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 RNPC3Q96LT9 517 aaKnown RBP19.07■□□□□ 0.64
SREBF1-219ENST00000580540 INPP4AQ96PE3 977 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-219ENST00000580540 NOC4LQ9BVI4 516 aaKnown RBP19.07■□□□□ 0.64
SREBF1-219ENST00000580540 BCAS3Q9H6U6 928 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 EHMT1Q9H9B1 1298 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 NCOA5Q9HCD5 579 aaKnown RBP19.07■□□□□ 0.64
SREBF1-219ENST00000580540 RIC8AQ9NPQ8 531 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 PDRG1Q9NUG6 133 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 BARHL2Q9NY43 387 aa19.07■□□□□ 0.64
SREBF1-219ENST00000580540 hCG_1984214I3L0E3 225 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 NOP56O00567 594 aaKnown RBP19.06■□□□□ 0.64
SREBF1-219ENST00000580540 SCG2P13521 617 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 ICAM3P32942 547 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 PSEN2P49810 448 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 SP4Q02446 784 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 SEMA3FQ13275 785 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 TOB2Q14106 344 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-219ENST00000580540 NEDD9Q14511 834 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 PPP1R18Q6NYC8 613 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 CYFIP1Q7L576 1253 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 ZNF713Q8N859 430 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-219ENST00000580540 TM6SF1Q9BZW5 370 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 SCN10AQ9Y5Y9 1956 aa19.06■□□□□ 0.64
SREBF1-219ENST00000580540 PPFIA4O75335 1185 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 PTPN11Q06124 597 aaPredicted RBP19.05■□□□□ 0.64
SREBF1-219ENST00000580540 MFSD10Q14728 455 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 PFKFB3Q16875 520 aaPredicted RBP19.05■□□□□ 0.64
SREBF1-219ENST00000580540 C7orf31Q8N865 590 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 KATNAL1Q9BW62 490 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 SLC26A6Q9BXS9 759 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 TMEM260Q9NX78 707 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
SREBF1-219ENST00000580540 PRPF3O43395 683 aaKnown RBP19.04■□□□□ 0.64
SREBF1-219ENST00000580540 STK3Q13188 491 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 PTGISQ16647 500 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 KIAA0753Q2KHM9 967 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 SCLYQ96I15 445 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.643e-9■■□□□ 12.2
SREBF1-219ENST00000580540 GLT8D2Q9H1C3 349 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 HDAC6Q9UBN7 1215 aa19.04■□□□□ 0.64
SREBF1-219ENST00000580540 FOSP01100 380 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-219ENST00000580540 JAKMIP3Q5VZ66 844 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 GDF6Q6KF10 455 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-219ENST00000580540 METTL7BQ6UX53 244 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 ZNF365Q70YC5 407 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 Q7L0L9 218 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 C16orf59Q7L2K0 433 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 RETREG2Q8NC44 543 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 GPRASP2Q96D09 838 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 ANO3Q9BYT9 981 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 WNT8AQ9H1J5 351 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 IL23AQ9NPF7 189 aa19.03■□□□□ 0.64
SREBF1-219ENST00000580540 CPLX1O14810 134 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 F2P00734 622 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 ITGB5P18084 799 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 EVCP57679 992 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 MTMR1Q13613 665 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 NTRK3Q16288 839 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 PKN1Q16512 942 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 TMEM240Q5SV17 173 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 UTP14CQ5TAP6 766 aaKnown RBP19.02■□□□□ 0.64
SREBF1-219ENST00000580540 CCDC12Q8WUD4 166 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-219ENST00000580540 CDHR1Q96JP9 859 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 SENP7Q9BQF6 1050 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 C6orf50Q9HD87 102 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 UBIAD1Q9Y5Z9 338 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 NID2Q14112 1375 aa19.02■□□□□ 0.64
SREBF1-219ENST00000580540 ATP9AO75110 1047 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 LGALS2P05162 132 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 HOXD8P13378 290 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 IFNAR1P17181 557 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 ZNF76P36508 570 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms