RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 INPP4AQ96PE3 977 aaPredicted RBP26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 PLEKHA8P1O95397 391 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 GGPS1O95749 300 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 ICAM3P32942 547 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 MRPS9P82933 396 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 SCN5AQ14524 2016 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 MFSD10Q14728 455 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 HSDL1Q3SXM5 330 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 NFXL1Q6ZNB6 911 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 SGMS1Q86VZ5 419 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 SRBD1Q8N5C6 995 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 AFAP1L1Q8TED9 768 aa26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 SEC63Q9UGP8 760 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-212ENST00000578845 ZNF286BP0CG31 522 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 CHMP4BP1P59074 171 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 GNPTABQ3T906 1256 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 DEFB128Q7Z7B8 93 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 SKAP1Q86WV1 359 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 PIBF1Q8WXW3 757 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 DHX38Q92620 1227 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 GPKOWQ92917 476 aaPredicted RBP eCLIP26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 SPATA33Q96N06 139 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 HDAC6Q9UBN7 1215 aa26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 YBX2Q9Y2T7 364 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-212ENST00000578845 MEIS2O14770 477 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 ACTN1P12814 892 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 KIAA0753Q2KHM9 967 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 RNF20Q5VTR2 975 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 C7orf31Q8N865 590 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 PCDHA11Q9Y5I1 949 aa26.33■■□□□ 1.81
CDKN2A-212ENST00000578845 GBF1Q92538 1859 aa26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 ZBBXA8MT70 800 aa26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 ATP2A2P16615 1042 aaKnown RBP26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 XRRA1Q6P2D8 792 aa26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 NKX2-4Q9H2Z4 354 aa26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 SLC12A7Q9Y666 1083 aa26.32■■□□□ 1.8
CDKN2A-212ENST00000578845 MYH7BA7E2Y1 1941 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 SPATA31C2B4DYI2 1134 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 PARNO95453 639 aaKnown RBP26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 PCNX4Q63HM2 1172 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 USP17L6PQ6QN14 398 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 CUL5Q93034 780 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 ZFP91Q96JP5 570 aaPredicted RBP26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 C16orf70Q9BSU1 422 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 ALG1Q9BT22 464 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 SLC28A3Q9HAS3 691 aa26.31■■□□□ 1.8
CDKN2A-212ENST00000578845 SELPP16109 830 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 RXRAP19793 462 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 SEMA3FQ13275 785 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 PTK7Q13308 1070 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 GPNMBQ14956 572 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 TSGA10IPQ3SY00 556 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 TMTC3Q6ZXV5 915 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 FANCBQ8NB91 859 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 SMARCC2Q8TAQ2 1214 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 PHOSPHO2Q8TCD6 241 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 SLC9A7Q96T83 725 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 LRRC2Q9BYS8 371 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 MLXIPQ9HAP2 919 aa26.3■■□□□ 1.8
CDKN2A-212ENST00000578845 FIBPO43427 364 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 BAIAP3O94812 1187 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 RABGGTBP53611 331 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 NEDD9Q14511 834 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 TRIM71Q2Q1W2 868 aaKnown RBP26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 METTL7BQ6UX53 244 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 LRRC8DQ7L1W4 858 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 CMTR1Q8N1G2 835 aaKnown RBP26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 GAS2L1Q99501 681 aaPredicted RBP26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 PRDM12Q9H4Q4 367 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 TRANK1O15050 2925 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 TET1Q8NFU7 2136 aa26.29■■□□□ 1.8
CDKN2A-212ENST00000578845 CDC45O75419 566 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 CXCL10P02778 98 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 CKBP12277 381 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 HOXC8P31273 242 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 NEK1Q96PY6 1258 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 SENP7Q9BQF6 1050 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 BCAS3Q9H6U6 928 aa26.28■■□□□ 1.8
CDKN2A-212ENST00000578845 SORBS3O60504 671 aa26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 EXOSC10Q01780 885 aaKnown RBP26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 TRAF7Q6Q0C0 670 aa26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 APOA5Q6Q788 366 aa26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 FTOQ9C0B1 505 aaKnown RBP eCLIP26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 PSTPIP2Q9H939 334 aa26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 TRIP12Q14669 1992 aaPredicted RBP26.27■■□□□ 1.8
CDKN2A-212ENST00000578845 LGALS2P05162 132 aa26.26■■□□□ 1.79
CDKN2A-212ENST00000578845 HIC1Q14526 733 aa26.26■■□□□ 1.79
CDKN2A-212ENST00000578845 MICU3Q86XE3 530 aa26.26■■□□□ 1.79
CDKN2A-212ENST00000578845 RTEL1Q9NZ71 1219 aa26.26■■□□□ 1.79
CDKN2A-212ENST00000578845 H3BRB1 525 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 MYOGP15173 224 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 ADGRE1Q14246 886 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 PPP2R2DQ66LE6 453 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 CYFIP1Q7L576 1253 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 DHX32Q7L7V1 743 aaKnown RBP26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 SERINC5Q86VE9 423 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 RAB11FIP4Q86YS3 637 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 TEX2Q8IWB9 1127 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 RASEFQ8IZ41 740 aa26.25■■□□□ 1.79
CDKN2A-212ENST00000578845 USP38Q8NB14 1042 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms