RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 FGBP02675 491 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 CALM1P0DP23 149 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 CALM2P0DP24 149 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 CALM3P0DP25 149 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 CASTP20810 708 aaKnown RBP13.71□□□□□ -0.21
LITAF-219ENST00000576334 DNAJB2P25686 324 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 SMARCA1P28370 1054 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 CDC27P30260 824 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 PSEN2P49810 448 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 PTGISQ16647 500 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 DGKDQ16760 1214 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 TSGA10IPQ3SY00 556 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 PPTC7Q8NI37 304 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 WNT8BQ93098 351 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
LITAF-219ENST00000576334 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 PBX4Q9BYU1 374 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
LITAF-219ENST00000576334 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
LITAF-219ENST00000576334 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 HAS3O00219 553 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 SUPT20HL2P0C7V6 817 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 MYOGP15173 224 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 GNAQP50148 359 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 RABGGTBP53611 331 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 SP4Q02446 784 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 FUT2Q10981 343 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 TRAF1Q13077 416 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 MFSD10Q14728 455 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 GPNMBQ14956 572 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
LITAF-219ENST00000576334 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 PGBD1Q96JS3 809 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
LITAF-219ENST00000576334 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
LITAF-219ENST00000576334 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
LITAF-219ENST00000576334 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
LITAF-219ENST00000576334 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 ADAMTS3O15072 1205 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 ZBTB43O43298 467 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 ATP9AO75110 1047 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 F2P00734 622 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 IQCF3P0C7M6 154 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 HSPA4P34932 840 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
LITAF-219ENST00000576334 RTN1Q16799 776 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 TRIM50Q86XT4 487 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 KCNB2Q92953 911 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 CUL5Q93034 780 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
LITAF-219ENST00000576334 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
LITAF-219ENST00000576334 VCANP13611 3396 aa13.69□□□□□ -0.22
LITAF-219ENST00000576334 GOLGA8AA7E2F4 631 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 ZBBXA8MT70 800 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 HOXD8P13378 290 aaPredicted RBP13.68□□□□□ -0.22
LITAF-219ENST00000576334 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
LITAF-219ENST00000576334 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 Q6ZUG5 572 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 SESTD1Q86VW0 696 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 PTPRSQ13332 1948 aa13.68□□□□□ -0.22
LITAF-219ENST00000576334 PPFIA4O75335 1185 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 LGALS2P05162 132 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 TGFB3P10600 412 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 ITGB5P18084 799 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 ICAM3P32942 547 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 TMCO2Q7Z6W1 182 aaPredicted RBP13.67□□□□□ -0.22
LITAF-219ENST00000576334 RETREG2Q8NC44 543 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 BRF1Q92994 677 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 GPR20Q99678 358 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
LITAF-219ENST00000576334 TMEM260Q9NX78 707 aa13.67□□□□□ -0.22
LITAF-219ENST00000576334 PCDHA6Q9UN73 950 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms