RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 PSMD2Q13200 908 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 CFAP221Q4G0U5 840 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 ALS2CLQ60I27 953 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 GBP6Q6ZN66 633 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 CAVIN3Q969G5 261 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 SBF2Q86WG5 1849 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 GNGT1P63211 74 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 PDIA5Q14554 519 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 TTC31Q49AM3 519 aaPredicted RBP19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 SLC9C1Q4G0N8 1177 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 ZNF804AQ7Z570 1209 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 PACS2Q86VP3 889 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 MYOCDQ8IZQ8 938 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 PROM2Q8N271 834 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 LRRC27Q9C0I9 530 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 TSKSQ9UJT2 592 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 LEMD3Q9Y2U8 911 aa19.03■□□□□ 0.64
TOM1L1-221ENST00000575882 RBAK-RBAKDNI3L0D1 243 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 NFIXQ14938 502 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 CCDC40Q4G0X9 1142 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 TMEM119Q4V9L6 283 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 EFCAB13Q8IY85 973 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 CEP72Q9P209 647 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 COL4A3BPQ9Y5P4 624 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 COL24A1Q17RW2 1714 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 GRIN2DO15399 1336 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 SPATA31A5Q5VU36 1347 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 SPATA31A7Q8IWB4 1347 aa19.02■□□□□ 0.64
TOM1L1-221ENST00000575882 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 EPB41P11171 864 aaKnown RBP19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 COASYQ13057 564 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 GLE1Q53GS7 698 aaKnown RBP19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 TTMPQ5BVD1 217 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 SFMBT2Q5VUG0 894 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 ARL8AQ96BM9 186 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 RABEP2Q9H5N1 569 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 EFCC1Q9HA90 598 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 NRAPQ86VF7 1730 aa19.02■□□□□ 0.63
TOM1L1-221ENST00000575882 TRAF5O00463 557 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 EIF3HO15372 352 aaKnown RBP eCLIP19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 TLR2O60603 784 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 PDHBP11177 359 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 NOP2P46087 812 aaKnown RBP19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 DNA2P51530 1060 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 FKBP3Q00688 224 aaKnown RBP19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 ECM1Q16610 540 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 ZCWPW2Q504Y3 356 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 FAM83BQ5T0W9 1011 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 PALMO75781 387 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 NOL4O94818 638 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 SERPING1P05155 500 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 TTC19Q6DKK2 380 aaPredicted RBP19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 FOXR2Q6PJQ5 311 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 BCAS4Q8TDM0 211 aa19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 LSM14BQ9BX40 385 aaKnown RBP19.01■□□□□ 0.63
TOM1L1-221ENST00000575882 GNPATO15228 680 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 GLI1P08151 1106 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 HOXA7P31268 230 aaPredicted RBP19■□□□□ 0.63
TOM1L1-221ENST00000575882 TNNI2P48788 182 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 POLR2FP61218 127 aaKnown RBP19■□□□□ 0.63
TOM1L1-221ENST00000575882 ARHGAP27Q6ZUM4 889 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 IFT20Q8IY31 132 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 DNAJC19Q96DA6 116 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 NUCKS1Q9H1E3 243 aaKnown RBP19■□□□□ 0.63
TOM1L1-221ENST00000575882 RNF14Q9UBS8 474 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 RPS6KA4O75676 772 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 FTCDO95954 541 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 NNTQ13423 1086 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 CERS3Q8IU89 383 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 SYN2Q92777 582 aaPredicted RBP19■□□□□ 0.63
TOM1L1-221ENST00000575882 ZIM3Q96PE6 472 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 ZNF831Q5JPB2 1677 aa19■□□□□ 0.63
TOM1L1-221ENST00000575882 EBAG9O00559 213 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 CARSP49589 748 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 GRAPQ13588 217 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 FAM26FQ5R3K3 315 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 FAM107BQ9H098 131 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 LUC7LQ9NQ29 371 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 GDF3Q9NR23 364 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 PANK4Q9NVE7 773 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 NFU1Q9UMS0 254 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 TNRC6CQ9HCJ0 1690 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 ESYT3A0FGR9 886 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 ZSCAN5CA6NGD5 496 aaPredicted RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 HEXIM1O94992 359 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 NOVP48745 357 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 APBA1Q02410 837 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 NAB2Q15742 525 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 LRRC47Q8N1G4 583 aaKnown RBP18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 GJA10Q969M2 543 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 TBC1D7Q9P0N9 293 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 ATP6V0A2Q9Y487 856 aa18.99■□□□□ 0.63
TOM1L1-221ENST00000575882 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
TOM1L1-221ENST00000575882 SHTN1A0MZ66 631 aa18.98■□□□□ 0.63
TOM1L1-221ENST00000575882 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms