RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 KAT2BQ92831 832 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 MSLNLQ96KJ4 702 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 STRBPQ96SI9 672 aaKnown RBP6.95□□□□□ -1.3
SMG6-219ENST00000575663 HAUS7Q99871 368 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 NACAP1Q9BZK3 213 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 ALG13Q9NP73 1137 aaKnown RBP6.95□□□□□ -1.3
SMG6-219ENST00000575663 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 BRWD1Q9NSI6 2320 aa6.95□□□□□ -1.3
SMG6-219ENST00000575663 ZFHX4Q86UP3 3567 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 TSPY2A6NKD2 308 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 GRM6O15303 877 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 LINC01565O15544 149 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 ZNF286BP0CG31 522 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 SRGAP2BP0DMP2 458 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 ATP5JP18859 108 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 RRP1P56182 461 aaKnown RBP6.94□□□□□ -1.3
SMG6-219ENST00000575663 TFAP4Q01664 338 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 ARHGAP1Q07960 439 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 COASYQ13057 564 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 ADAM15Q13444 863 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 SYDE2Q5VT97 1194 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 ADSSL1Q8N142 457 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 EFHBQ8N7U6 833 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 PPTC7Q8NI37 304 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
SMG6-219ENST00000575663 RIPOR3Q96MK2 946 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 PLVAPQ9BX97 442 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 EPB41L4AQ9HCS5 686 aaPredicted RBP6.94□□□□□ -1.3
SMG6-219ENST00000575663 MTMR7Q9Y216 660 aa6.94□□□□□ -1.3
SMG6-219ENST00000575663 USP15Q9Y4E8 981 aaPredicted RBP6.94□□□□□ -1.3
SMG6-219ENST00000575663 TECTAO75443 2155 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 BAZ2AQ9UIF9 1905 aaKnown RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 ZDBF2Q9HCK1 2354 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 C17orf102A2RUQ5 167 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 HAS3O00219 553 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 GPAA1O43292 621 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 HMMRO75330 724 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 CHGBP05060 677 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 CTSHP09668 335 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 ATF7P17544 494 aaPredicted RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMG6-219ENST00000575663 LAMC2Q13753 1193 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 BTG3Q14201 252 aaPredicted RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 STXBP2Q15833 593 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 LY6KQ17RY6 165 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 CCDC62Q6P9F0 684 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 SEPT14Q6ZU15 432 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 DGLUCYQ7Z3D6 616 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 APPBP2Q92624 585 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 CLP1Q92989 425 aaKnown RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 P2RX5Q93086 422 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 WNT8BQ93098 351 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 MAF1Q9H063 256 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 NAPBQ9H115 298 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
SMG6-219ENST00000575663 MRVI1Q9Y6F6 885 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 WDR19Q8NEZ3 1342 aa6.93□□□□□ -1.3
SMG6-219ENST00000575663 KMT2EQ8IZD2 1858 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 DCHS1Q96JQ0 3298 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 ZFYP08048 801 aaPredicted RBP6.92□□□□□ -1.3
SMG6-219ENST00000575663 SLC16A2P36021 539 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 NRIP1P48552 1158 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 ZNF200P98182 395 aaPredicted RBP6.92□□□□□ -1.3
SMG6-219ENST00000575663 PPARAQ07869 468 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 MTMR3Q13615 1198 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 NAALADL2Q58DX5 795 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 BTNL9Q6UXG8 535 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 FRMD5Q7Z6J6 570 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 UBALD2Q8IYN6 164 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 IFNL3Q8IZI9 196 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
SMG6-219ENST00000575663 CLEC4DQ8WXI8 215 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 ATP6V0A1Q93050 837 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 OSBP2Q969R2 916 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 NEK1Q96PY6 1258 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 IWS1Q96ST2 819 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 MFSD1Q9H3U5 465 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 CLEC1BQ9P126 229 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 FRMPD2Q68DX3 1309 aaPredicted RBP6.92□□□□□ -1.3
SMG6-219ENST00000575663 CCDC171Q6TFL3 1326 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 TET1Q8NFU7 2136 aa6.92□□□□□ -1.3
SMG6-219ENST00000575663 MED19A0JLT2 244 aaPredicted RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 TULP1O00294 542 aaPredicted RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 PDGFBP01127 241 aaPredicted RBP6.91□□□□□ -1.3
SMG6-219ENST00000575663 GNAT1P11488 350 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 USH1GQ495M9 461 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 KBTBD3Q8NAB2 608 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 POF1BQ8WVV4 589 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
SMG6-219ENST00000575663 CDCA3Q99618 268 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms