RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 PTPRSQ13332 1948 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 CHD9Q3L8U1 2897 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 NFIBO00712 420 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 FGAP02671 866 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 HSPD1P10809 573 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 STAT2P52630 851 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 DHX9Q08211 1270 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 NCOA4Q13772 614 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 RCSD1Q6JBY9 416 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 SLC30A10Q6XR72 485 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 ZKSCAN3Q9BRR0 538 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 ACAD9Q9H845 621 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 PRKAG2Q9UGJ0 569 aa10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 BAZ2BQ9UIF8 2168 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-210ENST00000572824 GRIN2DO15399 1336 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 TET1Q8NFU7 2136 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 GRXCR1A8MXD5 290 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 ASGR1P07306 291 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 SMPD1P17405 629 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 COPB2P35606 906 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 PSMC6P62333 389 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 NNTQ13423 1086 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 NSMFQ6X4W1 530 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 C16orf59Q7L2K0 433 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 RNF180Q86T96 592 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 STAG1Q8WVM7 1258 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 MYLIPQ8WY64 445 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 RILPL2Q969X0 211 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 EVI5LQ96CN4 794 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 UPF3AQ9H1J1 476 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 TMPRSS4Q9NRS4 437 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 TBX21Q9UL17 535 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 FAM184BQ9ULE4 1060 aa10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 CTDP1Q9Y5B0 961 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-210ENST00000572824 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.67
NPLOC4-210ENST00000572824 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 TANC1Q9C0D5 1861 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 DOCK5Q9H7D0 1870 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 CCDC171Q6TFL3 1326 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 SCN10AQ9Y5Y9 1956 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 ORC4O43929 436 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 FGRP09769 529 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 ACRP10323 421 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 NOVP48745 357 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 EML3Q32P44 896 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 CXCL17Q6UXB2 119 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 CYP39A1Q9NYL5 469 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 CCPG1Q9ULG6 757 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 STXBP5LQ9Y2K9 1186 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 REV3LO60673 3130 aa10.89□□□□□ -0.67
NPLOC4-210ENST00000572824 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 DLL1O00548 723 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 DUSP11O75319 330 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 PDHBP11177 359 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 RAG1P15918 1043 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 CST5P28325 142 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 CYP2C18P33260 490 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 OAZ1P54368 228 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 GJA9P57773 515 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 BAATQ14032 418 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 MCMDC2Q4G0Z9 681 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 TAPT1Q6NXT6 567 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 FAM126BQ8IXS8 530 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 COPS5Q92905 334 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 PBXIP1Q96AQ6 731 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 VWCEQ96DN2 955 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 CDX2Q99626 313 aaPredicted RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.88□□□□□ -0.672e-18■■■□□ 18.5
NPLOC4-210ENST00000572824 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 HELLSQ9NRZ9 838 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 GNEQ9Y223 722 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
NPLOC4-210ENST00000572824 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 CSF2RAP15509 400 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 CDK7P50613 346 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 TNFAIP2Q03169 654 aa10.87□□□□□ -0.67
NPLOC4-210ENST00000572824 FPGSQ05932 587 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms