RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ADAM11O75078 769 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 HOXB7P09629 217 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 RAB27AP51159 221 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 TEFQ10587 303 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 MAP4K2Q12851 820 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 STAT4Q14765 748 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-222ENST00000570139 CHPFQ8IZ52 775 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 MYO1HQ8N1T3 1032 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 PIDD1Q9HB75 910 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 DISC1Q9NRI5 854 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 TSPYL4Q9UJ04 414 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 ZNF451Q9Y4E5 1061 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 SPEF1Q9Y4P9 236 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
CNOT1-222ENST00000570139 DISP2A7MBM2 1401 aa8.71□□□□□ -1.01
CNOT1-222ENST00000570139 DDX3YO15523 660 aaKnown RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 ZEB2O60315 1214 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 KPNA6O60684 536 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 JMJD7P0C870 316 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 PHKG2P15735 406 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 PIN1Q13526 163 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 AUHQ13825 339 aaKnown RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 UBE4AQ14139 1066 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 SLBPQ14493 270 aaKnown RBP eCLIP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 NBPF12Q5TAG4 269 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 PASD1Q8IV76 773 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 DTWD1Q8N5C7 304 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 CHMP4CQ96CF2 233 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 ZNF512BQ96KM6 892 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 MAGEB10Q96LZ2 347 aaPredicted RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 RPS6KC1Q96S38 1066 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 SMAD5Q99717 465 aaKnown RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 FOXQ1Q9C009 403 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 CHMP4BQ9H444 224 aaKnown RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 GP6Q9HCN6 339 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 CYP4F12Q9HCS2 524 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 ZIM2Q9NZV7 527 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 GMPR2Q9P2T1 348 aaKnown RBP8.71□□□□□ -1.02
CNOT1-222ENST00000570139 PAPPAQ13219 1627 aa8.71□□□□□ -1.02
CNOT1-222ENST00000570139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 RNMTO43148 476 aaKnown RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 TBX1O43435 398 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 AKAP10O43572 662 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 DLX3O60479 287 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 NAT1P18440 290 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 DCTN1Q14203 1278 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 TTLL4Q14679 1199 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 CFAP100Q494V2 611 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 ZBTB46Q86UZ6 589 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 IL17REQ8NFR9 667 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 OR2W6PQ8NHA6 318 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 CAMKK2Q96RR4 588 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 THUMPD2Q9BTF0 503 aaKnown RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 TMPRSS13Q9BYE2 586 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 SMC4Q9NTJ3 1288 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 CGGBP1Q9UFW8 167 aaPredicted RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 APOBEC2Q9Y235 224 aaKnown RBP8.7□□□□□ -1.02
CNOT1-222ENST00000570139 LAMB4A4D0S4 1761 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 TNS2Q63HR2 1409 aa8.7□□□□□ -1.02
CNOT1-222ENST00000570139 N4BP2Q86UW6 1770 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-222ENST00000570139 MEGF11A6BM72 1044 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 VAMP4O75379 141 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 KCNH1O95259 989 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
CNOT1-222ENST00000570139 HOXC12P31275 282 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 GRB10Q13322 594 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 ZNF460Q14592 562 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 FGD2Q7Z6J4 655 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 ADCY4Q8NFM4 1077 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 CDH19Q9H159 772 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 SUGCTQ9HAC7 445 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.69□□□□□ -1.02
CNOT1-222ENST00000570139 SSU72Q9NP77 194 aaKnown RBP8.69□□□□□ -1.02
CNOT1-222ENST00000570139 AASDHPPTQ9NRN7 309 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
CNOT1-222ENST00000570139 KDM6AO15550 1401 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-222ENST00000570139 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 GOLGA6CA6NDK9 693 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 GOLGA6BA6NDN3 693 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 FAM181BA6NEQ2 426 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 AQP7O14520 342 aa8.68□□□□□ -1.02
CNOT1-222ENST00000570139 RNGTTO60942 597 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms