RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 SEMA3FQ13275 785 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ALX1Q15699 326 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CDCA2Q69YH5 1023 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TTC19Q6DKK2 380 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 DIS3L2Q8IYB7 885 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CCDC155Q8N6L0 562 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 FERMT2Q96AC1 680 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 AIDAQ96BJ3 306 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CAPZA3Q96KX2 299 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ATP6V1G3Q96LB4 118 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 RIOK1Q9BRS2 568 aaKnown RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 BEGAINQ9BUH8 593 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 EBF2Q9HAK2 575 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 EPB41L4AQ9HCS5 686 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 STK32BQ9NY57 414 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SLC12A6Q9UHW9 1150 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 DENND2AQ9ULE3 1009 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CTNND2Q9UQB3 1225 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 H7C1D1 291 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 PPEF1O14829 653 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF263O14978 683 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 NR1D1P20393 614 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SLC8A1P32418 973 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SSTR3P32745 418 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 GUCY1A2P33402 732 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 GUCY1A3Q02108 690 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 ZNF658Q5TYW1 1059 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CRELD2Q6UXH1 353 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 LRIG3Q6UXM1 1119 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SMYD4Q8IYR2 804 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SH2D3CQ8N5H7 860 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TRIM58Q8NG06 486 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TBC1D16Q8TBP0 767 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SLC16A10Q8TF71 515 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TATDN2Q93075 761 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 SHISA4Q96DD7 197 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 CYFIP2Q96F07 1278 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 MASTLQ96GX5 879 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 MTRQ99707 1265 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 MTA3Q9BTC8 594 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TRIM6Q9C030 488 aaPredicted RBP6.03□□□□□ -1.44
LINC01541-202ENST00000568095 BATF3Q9NR55 127 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 TFR2Q9UP52 801 aa6.03□□□□□ -1.44
LINC01541-202ENST00000568095 FAM205AQ6ZU69 1335 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 ZNF532Q9HCE3 1301 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 H0YGN5 161 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PJA2O43164 708 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TRAPPC3O43617 180 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PDHBP11177 359 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 IDEP14735 1019 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TCP1P17987 556 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 EEF1GP26641 437 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PDE6BP35913 854 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PAK1Q13153 545 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 RIPK1Q13546 671 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 NBPF9Q3BBW0 867 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 ZNF483Q8TF39 744 aaPredicted RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 NSUN4Q96CB9 384 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 HOOK2Q96ED9 719 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 EPSTI1Q96J88 318 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 STRBPQ96SI9 672 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 OSBPL9Q96SU4 736 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 NUP58Q9BVL2 599 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 VPS16Q9H269 839 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 THAP9Q9H5L6 903 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 RABEP2Q9H5N1 569 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 SH2D4AQ9H788 454 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 NHEJ1Q9H9Q4 299 aaPredicted RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TMBIM4Q9HC24 238 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 GPCPD1Q9NPB8 672 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TAB2Q9NYJ8 693 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 LUC7L2Q9Y383 392 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 NFS1Q9Y697 457 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 ROBO3Q96MS0 1386 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 A0A1B0GUA9 196 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 GOLGA6L7A0A1B0GV03 622 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 GPAA1O43292 621 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PPIP5K2O43314 1243 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 KRT14P02533 472 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 ATP2B4P23634 1241 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 CYLC1P35663 651 aaPredicted RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 HSPA9P38646 679 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 FKBP4Q02790 459 aaKnown RBP eCLIP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 UBXN1Q04323 297 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 GRIPAP1Q4V328 841 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 MSL1Q68DK7 614 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 KLHL10Q6JEL2 608 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 SYMPKQ92797 1274 aaKnown RBP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 UPF1Q92900 1129 aaKnown RBP eCLIP6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TNFRSF25Q93038 417 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 TMUB1Q9BVT8 246 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 RNF14Q9UBS8 474 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 DUSP10Q9Y6W6 482 aa6.02□□□□□ -1.45
LINC01541-202ENST00000568095 C19orf67A6NJJ6 358 aa6.01□□□□□ -1.45
LINC01541-202ENST00000568095 GOLGA8AA7E2F4 631 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms