RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 TECTAO75443 2155 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 USP34Q70CQ2 3546 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 UMODL1Q5DID0 1318 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 TRIOO75962 3097 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 A0A1W2PQ45 241 aaPredicted RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 A0A1W2PQY0 241 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 M0R2C6 588 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 PRKAB2O43741 272 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 MSCO60682 206 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 ENTPD3O75355 529 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 IDH1O75874 414 aaKnown RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 IL9P15248 144 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 PDE6AP16499 860 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 HOXA7P31268 230 aaPredicted RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 SOX11P35716 441 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 BACE1P56817 501 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 NMIQ13287 307 aaPredicted RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 GNASQ5JWF2 1037 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 SLC9C2Q5TAH2 1124 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 RASIP1Q5U651 963 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 MFSD5Q6N075 450 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 PHLDB3Q6NSJ2 640 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 GJD3Q8N144 294 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 MIGA1Q8NAN2 632 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 HERVK_113Q902F9 699 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 IDI2Q9BXS1 227 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 NDFIP2Q9NV92 336 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 LRP2BPQ9P2M1 347 aa7.35□□□□□ -1.23
UBFD1-204ENST00000565634 RIF1Q5UIP0 2472 aaKnown RBP7.35□□□□□ -1.23
UBFD1-204ENST00000565634 SIPA1L1O43166 1804 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 ZNF532Q9HCE3 1301 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 C5orf42Q9H799 3197 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 A0A0D9SFI3 127 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 KRBA1A5PL33 1030 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 SLC15A5A6NIM6 579 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 DCDC2CA8MYV0 355 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 FOXP2O15409 715 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 RNF113AO15541 343 aaKnown RBP7.34□□□□□ -1.23
UBFD1-204ENST00000565634 SEPT4O43236 478 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 ADAM23O75077 832 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 FGBP02675 491 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 HOXB4P17483 251 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-204ENST00000565634 CYP7A1P22680 504 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 CHMLP26374 656 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 ADD2P35612 726 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 BTDP43251 543 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 CCL23P55773 120 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 COL9A3Q14050 684 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-204ENST00000565634 VPS53Q5VIR6 699 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 KBTBD3Q8NAB2 608 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 PRSS33Q8NF86 280 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 ARNTL2Q8WYA1 636 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 OSBPL5Q9H0X9 879 aaPredicted RBP7.34□□□□□ -1.23
UBFD1-204ENST00000565634 PHF24Q9UPV7 400 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 GNEQ9Y223 722 aaKnown RBP7.34□□□□□ -1.23
UBFD1-204ENST00000565634 MYO10Q9HD67 2058 aa7.34□□□□□ -1.23
UBFD1-204ENST00000565634 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
UBFD1-204ENST00000565634 FAM186AA6NE01 2351 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 SALL1Q9NSC2 1324 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 MYADML2A6NDP7 307 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 BNIP3LO60238 219 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 COL8A1P27658 744 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 ADORA2AP29274 412 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 RHBDL3P58872 404 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 CTBSQ01459 385 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 PTH1RQ03431 593 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 USP4Q13107 963 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 PPIGQ13427 754 aaKnown RBP eCLIP7.33□□□□□ -1.24
UBFD1-204ENST00000565634 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
UBFD1-204ENST00000565634 RAB30Q15771 203 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 ZMYM1Q5SVZ6 1142 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 ZNF589Q86UQ0 364 aaPredicted RBP7.33□□□□□ -1.24
UBFD1-204ENST00000565634 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 SH3RF3Q8TEJ3 882 aaPredicted RBP7.33□□□□□ -1.24
UBFD1-204ENST00000565634 EDARADDQ8WWZ3 215 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 EVI5LQ96CN4 794 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 ABHD17AQ96GS6 310 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 ARMT1Q9H993 441 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 XPNPEP3Q9NQH7 507 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 INCENPQ9NQS7 918 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 STARD7Q9NQZ5 370 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 SUGT1Q9Y2Z0 365 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 TRANK1O15050 2925 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
UBFD1-204ENST00000565634 PDS5AQ29RF7 1337 aaKnown RBP7.32□□□□□ -1.24
UBFD1-204ENST00000565634 CYP2D7A0A087X1C5 515 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 GPR75-ASB3A0A0A6YYF3 556 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 IGHA2P01877 340 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 CA3P07451 260 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 CYP2D6P10635 497 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 GRB14Q14449 540 aa7.32□□□□□ -1.24
UBFD1-204ENST00000565634 KCNA10Q16322 511 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms