RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 NUCKS1Q9H1E3 243 aaKnown RBP22.47■■□□□ 1.19
E4F1-204ENST00000564139 TAF1DQ9H5J8 278 aaPredicted RBP22.47■■□□□ 1.19
E4F1-204ENST00000564139 CEP72Q9P209 647 aa22.47■■□□□ 1.19
E4F1-204ENST00000564139 BCL9O00512 1426 aa22.47■■□□□ 1.19
E4F1-204ENST00000564139 PVALEFA0A1B0GWK0 134 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 RDXP35241 583 aaKnown RBP22.46■■□□□ 1.19
E4F1-204ENST00000564139 KCNMA1Q12791 1236 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 CAVIN4Q5BKX8 364 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 SFMBT2Q5VUG0 894 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 SLC40A1Q9NP59 571 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 MYMKA6NI61 221 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 CYTH3O43739 400 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 TLR2O60603 784 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 KLRC1P26715 233 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 TFAP4Q01664 338 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 UBE4AQ14139 1066 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 KRT25Q7Z3Z0 450 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 TEX2Q8IWB9 1127 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 EIF1ADQ8N9N8 165 aaKnown RBP22.46■■□□□ 1.19
E4F1-204ENST00000564139 USP38Q8NB14 1042 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 C3orf20Q8ND61 904 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 TANGO6Q9C0B7 1094 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 ACTR5Q9H9F9 607 aaPredicted RBP22.46■■□□□ 1.19
E4F1-204ENST00000564139 NLRC4Q9NPP4 1024 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 PPANQ9NQ55 473 aaKnown RBP22.46■■□□□ 1.19
E4F1-204ENST00000564139 IL17RBQ9NRM6 502 aa22.46■■□□□ 1.19
E4F1-204ENST00000564139 GCOM1H8Y6P7 765 aaPredicted RBP22.45■■□□□ 1.18
E4F1-204ENST00000564139 ADAMTS2O95450 1211 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 MYZAPP0CAP1 466 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 EHHADHQ08426 723 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 CCDC121Q6ZUS5 278 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 ANKS1AQ92625 1134 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 ISCUQ9H1K1 167 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 COL4A1P02462 1669 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 MMP14P50281 582 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 MECOMQ03112 1051 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 NONOQ15233 471 aaKnown RBP eCLIP22.45■■□□□ 1.182e-6■■■■□ 26
E4F1-204ENST00000564139 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 BLOC1S4Q9NUP1 217 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 TMEM59LQ9UK28 342 aa22.45■■□□□ 1.18
E4F1-204ENST00000564139 PACSIN2Q9UNF0 486 aaPredicted RBP22.45■■□□□ 1.18
E4F1-204ENST00000564139 ERCC3P19447 782 aa22.44■■□□□ 1.18
E4F1-204ENST00000564139 HSD17B3P37058 310 aa22.44■■□□□ 1.18
E4F1-204ENST00000564139 RNASE9P60153 205 aaKnown RBP22.44■■□□□ 1.18
E4F1-204ENST00000564139 PREPLQ4J6C6 727 aaPredicted RBP22.44■■□□□ 1.18
E4F1-204ENST00000564139 KLHL7Q8IXQ5 586 aa22.44■■□□□ 1.18
E4F1-204ENST00000564139 CENPHQ9H3R5 247 aa22.44■■□□□ 1.18
E4F1-204ENST00000564139 KIAA1551Q9HCM1 1747 aa22.44■■□□□ 1.18
E4F1-204ENST00000564139 GMNCA6NCL1 334 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 ERVK-9P63128 1117 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 GRB10Q13322 594 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 HLTFQ14527 1009 aaKnown RBP eCLIP22.43■■□□□ 1.18
E4F1-204ENST00000564139 FAM83BQ5T0W9 1011 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 STK17AQ9UEE5 414 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 ATP6V0A2Q9Y487 856 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 H0YGN5 161 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 NOL4O94818 638 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 NTSR2O95665 410 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 ECHS1P30084 290 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 FAM84BQ96KN1 310 aaPredicted RBP22.43■■□□□ 1.18
E4F1-204ENST00000564139 TSG101Q99816 390 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 ZMYND12Q9H0C1 365 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 SLC12A6Q9UHW9 1150 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 NFS1Q9Y697 457 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 SCN7AQ01118 1682 aa22.43■■□□□ 1.18
E4F1-204ENST00000564139 CDR1P51861 262 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 CUL1Q13616 776 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 NEDD9Q14511 834 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 SLC18A3Q16572 532 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 DYMQ7RTS9 669 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 NEK8Q86SG6 692 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 CCDC114Q96M63 670 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 DONSONQ9NYP3 566 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 DDX20Q9UHI6 824 aaKnown RBP22.42■■□□□ 1.18
E4F1-204ENST00000564139 MCM8Q9UJA3 840 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 GOLGA6L7A0A1B0GV03 622 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 GIMAP7Q8NHV1 300 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 TBC1D5Q92609 795 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 TAF4BQ92750 862 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 LRRC45Q96CN5 670 aa22.42■■□□□ 1.18
E4F1-204ENST00000564139 CES2O00748 559 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 TRAPPC3O43617 180 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 C21orf2O43822 256 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 BIRC3Q13489 604 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 UAP1Q16222 522 aaPredicted RBP22.41■■□□□ 1.18
E4F1-204ENST00000564139 FOXR2Q6PJQ5 311 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 LSM14BQ9BX40 385 aaKnown RBP22.41■■□□□ 1.18
E4F1-204ENST00000564139 RIC8AQ9NPQ8 531 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 MCM9Q9NXL9 1143 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 CHRM1P11229 460 aaPredicted RBP22.41■■□□□ 1.18
E4F1-204ENST00000564139 NAPAP54920 295 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 ZNF844Q08AG5 666 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 KIAA0753Q2KHM9 967 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 SLC4A8Q2Y0W8 1093 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 PROM2Q8N271 834 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 LARP4BQ92615 738 aaKnown RBP22.41■■□□□ 1.18
E4F1-204ENST00000564139 PNMA5Q96PV4 448 aa22.41■■□□□ 1.18
E4F1-204ENST00000564139 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 POLR2FP61218 127 aaKnown RBP22.4■■□□□ 1.18
E4F1-204ENST00000564139 OR2W6PQ8NHA6 318 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms