RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 PCDHA5Q9Y5H7 936 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 HCFC2Q9Y5Z7 792 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 FHAD1B1AJZ9 1412 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 KIF27Q86VH2 1401 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 IRS2Q9Y4H2 1338 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 AQP7O14520 342 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 APPP05067 770 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 FAM153BP0C7A2 387 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 GPR85P60893 370 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 BMS1Q14692 1282 aaKnown RBP7.23□□□□□ -1.25
LINC00254-201ENST00000563416 MAMDC2Q7Z304 686 aaPredicted RBP7.23□□□□□ -1.25
LINC00254-201ENST00000563416 IFNL3Q8IZI9 196 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 ZSWIM2Q8NEG5 633 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC00254-201ENST00000563416 THAP3Q8WTV1 239 aaPredicted RBP7.23□□□□□ -1.25
LINC00254-201ENST00000563416 DHRS4Q9BTZ2 278 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 ZSWIM4Q9H7M6 989 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 KCTD3Q9Y597 815 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 NUP160Q12769 1436 aa7.23□□□□□ -1.25
LINC00254-201ENST00000563416 CTTNBP2Q8WZ74 1663 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 CCDC163A0A0D9SF12 145 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 IRS4O14654 1257 aaPredicted RBP7.22□□□□□ -1.25
LINC00254-201ENST00000563416 NUAK1O60285 661 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 MAFKO60675 156 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 NAT1P18440 290 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 NTRK3Q16288 839 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 FAM209AQ5JX71 171 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 IGDCC3Q8IVU1 814 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 LRRC56Q8IYG6 542 aaPredicted RBP7.22□□□□□ -1.25
LINC00254-201ENST00000563416 NLGN1Q8N2Q7 840 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 ALG1Q9BT22 464 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 LNPKQ9C0E8 428 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
LINC00254-201ENST00000563416 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
LINC00254-201ENST00000563416 KRIT1O00522 736 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 MSCO60682 206 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 NCKAP1LP55160 1127 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 GABREP78334 506 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 KCNT2Q6UVM3 1135 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 LBX2Q6XYB7 198 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 TMEM151BQ8IW70 566 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 EXOC2Q96KP1 924 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 MRPS23Q9Y3D9 190 aaKnown RBP7.21□□□□□ -1.26
LINC00254-201ENST00000563416 SIT1Q9Y3P8 196 aa7.21□□□□□ -1.26
LINC00254-201ENST00000563416 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 BLACEA4D250 179 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 HGSO14964 777 aaPredicted RBP7.2□□□□□ -1.26
LINC00254-201ENST00000563416 SGSM2O43147 1006 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 ASGR2P07307 311 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 PI3P19957 117 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 FBLN1P23142 703 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 GRK2P25098 689 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 PMLP29590 882 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 GRK3P35626 688 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 KRTAP19-4Q3LI73 84 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 CCDC144BQ3MJ40 725 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 C2orf27AQ580R0 203 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 STEAP3Q658P3 488 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 MILR1Q7Z6M3 343 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 JMYQ8N9B5 988 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 CPA5Q8WXQ8 436 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 PALD1Q9ULE6 856 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 ZNF652Q9Y2D9 606 aa7.2□□□□□ -1.26
LINC00254-201ENST00000563416 CFPP27918 469 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 JAG1P78504 1218 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 SSPNQ14714 243 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 FOXB2Q5VYV0 432 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 CNKSR3Q6P9H4 555 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 ETV3LQ6ZN32 361 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 MTDHQ86UE4 582 aaKnown RBP7.19□□□□□ -1.26
LINC00254-201ENST00000563416 YIPF4Q9BSR8 244 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 NUB1Q9Y5A7 615 aa7.19□□□□□ -1.26
LINC00254-201ENST00000563416 FAM47E-STBD1D6RA91 191 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 IGFBP6P24592 240 aaPredicted RBP7.18□□□□□ -1.26
LINC00254-201ENST00000563416 SPIRE1Q08AE8 756 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 EMC4Q5J8M3 183 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 TCERG1LQ5VWI1 586 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 CYP4F22Q6NT55 531 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
LINC00254-201ENST00000563416 FAM129CQ86XR2 697 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 CILP2Q8IUL8 1156 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.18□□□□□ -1.26
LINC00254-201ENST00000563416 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 IRF2BPLQ9H1B7 796 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 BCAS3Q9H6U6 928 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 NGRNQ9NPE2 291 aaKnown RBP7.18□□□□□ -1.26
LINC00254-201ENST00000563416 TRAF6Q9Y4K3 522 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 PCDHB4Q9Y5E5 795 aa7.18□□□□□ -1.26
LINC00254-201ENST00000563416 ARAP1Q96P48 1450 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 EFCAB14O75071 495 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 SOD2P04179 222 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 C6orf222P0C671 652 aaPredicted RBP7.17□□□□□ -1.26
LINC00254-201ENST00000563416 GNAT1P11488 350 aa7.17□□□□□ -1.26
LINC00254-201ENST00000563416 FOXO4P98177 505 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms