RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ADSSL1Q8N142 457 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 KDF1Q8NAX2 398 aaPredicted RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 SPATA5Q8NB90 893 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 RETREG2Q8NC44 543 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 PABPC5Q96DU9 382 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 MRPL38Q96DV4 380 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 XAGE2Q96GT9 111 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 RAD9AQ99638 391 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 ALDH8A1Q9H2A2 487 aaPredicted RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 ALG13Q9NP73 1137 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 TRMT13Q9NUP7 481 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 HMG20BQ9P0W2 317 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 GRIN2DO15399 1336 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 DMDP11532 3685 aa6.46□□□□□ -1.37
HERC1-213ENST00000561359 A0A1W2PRG0 241 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 A0A1W2PRU2 124 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 LINC01553A4QN01 128 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 STXBP3O00186 592 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 CTAGE5O15320 804 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 BAIAP3O94812 1187 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 GUCY1A2P33402 732 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 COPB2P35606 906 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 USP5P45974 858 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 ZXDAP98168 799 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 EXOSC9Q06265 439 aaKnown RBP6.46□□□□□ -1.38
HERC1-213ENST00000561359 SMAD2Q15796 467 aaKnown RBP6.46□□□□□ -1.38
HERC1-213ENST00000561359 TCEAL5Q5H9L2 206 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
HERC1-213ENST00000561359 MAMDC4Q6UXC1 1216 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 PRICKLE2Q7Z3G6 844 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 TLK2Q86UE8 772 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 WWC1Q8IX03 1113 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 NKD2Q969F2 451 aaPredicted RBP6.46□□□□□ -1.38
HERC1-213ENST00000561359 NEUROD6Q96NK8 337 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 AP5M1Q9H0R1 490 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 DOLKQ9UPQ8 538 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 TNKSO95271 1327 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 FANCIQ9NVI1 1328 aa6.46□□□□□ -1.38
HERC1-213ENST00000561359 COL4A6Q14031 1691 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 MYO7AQ13402 2215 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 A0A1B0GUL7 405 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 CDC14CA4D256 554 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 DYNC1LI2O43237 492 aaPredicted RBP6.45□□□□□ -1.38
HERC1-213ENST00000561359 RAD21O60216 631 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 NBL1P41271 181 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 WDR5P61964 334 aaKnown RBP6.45□□□□□ -1.38
HERC1-213ENST00000561359 SEMA3FQ13275 785 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 KIAA1755Q5JYT7 1200 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 FAM117BQ6P1L5 589 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 ARMCX2Q7L311 632 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 RPAINQ86UA6 219 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC1-213ENST00000561359 COL26A1Q96A83 441 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 RMDN1Q96DB5 314 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 C17orf80Q9BSJ5 609 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 USP44Q9H0E7 712 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 ARHGEF10LQ9HCE6 1279 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 STK17AQ9UEE5 414 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 PA2G4Q9UQ80 394 aaKnown RBP6.45□□□□□ -1.38
HERC1-213ENST00000561359 AKAP2Q9Y2D5 859 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 FASNP49327 2511 aaKnown RBP6.45□□□□□ -1.38
HERC1-213ENST00000561359 ZNF292O60281 2723 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 ASTN1O14525 1302 aa6.45□□□□□ -1.38
HERC1-213ENST00000561359 DNAH14Q0VDD8 3507 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 SIPA1L1O43166 1804 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 SLC35F4A4IF30 521 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 FAM181BA6NEQ2 426 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 VWA5AO00534 786 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 WDR46O15213 610 aaKnown RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 MBTPS2O43462 519 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 NCK2O43639 380 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 GJB5O95377 273 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 IQCF3P0C7M6 154 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 VSIG8P0DPA2 414 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 RHOQP17081 205 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 SHMT1P34896 483 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 RNF144AP50876 292 aaPredicted RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 DYNLL1P63167 89 aaKnown RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 NKX3-2P78367 333 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 DEFB103AP81534 67 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 SIGLEC14Q08ET2 396 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 BFSP2Q13515 415 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 COL9A2Q14055 689 aaPredicted RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 OXLD1Q5BKU9 147 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 FAM47CQ5HY64 1035 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 FRMD5Q7Z6J6 570 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 ADGRA1Q86SQ6 560 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 TTC6Q86TZ1 520 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 MAGEB6Q8N7X4 407 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 EHD4Q9H223 541 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 OSBPL3Q9H4L5 887 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 NSUN3Q9H649 340 aaKnown RBP6.44□□□□□ -1.38
HERC1-213ENST00000561359 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 FBXO28Q9NVF7 368 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 COL4A4P53420 1690 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms