RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 FIBPO43427 364 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 FOSP01100 380 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 MMP3P08254 477 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 TGFB3P10600 412 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 GNA11P29992 359 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 SEMA3FQ13275 785 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 NLRX1Q86UT6 975 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 REXO1Q8N1G1 1221 aaKnown RBP22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 AIFM3Q96NN9 605 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 PRKAG2Q9UGJ0 569 aa22.79■■□□□ 1.24
TSPAN3-210ENST00000561277 ARVCFO00192 962 aa22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 ITGA7Q13683 1181 aa22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 LAMC2Q13753 1193 aa22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 CELF3Q5SZQ8 465 aaKnown RBP22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 CHRDL2Q6WN34 429 aa22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 GTF3C6Q969F1 213 aa22.78■■□□□ 1.24
TSPAN3-210ENST00000561277 SPATA31C2B4DYI2 1134 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 ITGB5P18084 799 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 ICAM3P32942 547 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 NLRP5P59047 1200 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 RASGRP4Q8TDF6 673 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 EMID1Q96A84 441 aaPredicted RBP22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 SPATA33Q96N06 139 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 MTG1Q9BT17 334 aaPredicted RBP22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 MLXIPQ9HAP2 919 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 PDLIM7Q9NR12 457 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 SH3GLB2Q9NR46 395 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 RANBP2P49792 3224 aaKnown RBP22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 MYH7BA7E2Y1 1941 aa22.77■■□□□ 1.24
TSPAN3-210ENST00000561277 CTDNEP1O95476 244 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 CHMP4BP1P59074 171 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 HSDL1Q3SXM5 330 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 MYSM1Q5VVJ2 828 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 PPTC7Q8NI37 304 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 BICD2Q8TD16 824 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 BCAS3Q9H6U6 928 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 GRIN2DO15399 1336 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 MROH7Q68CQ1 1323 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 DCDC2CA8MYV0 355 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 CLTBP09497 229 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 SREBF1P36956 1147 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 CDK7P50613 346 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 MTMR1Q13613 665 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 ANKRD33Q7Z3H0 272 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 SH3RF1Q7Z6J0 888 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 PPP1R13LQ8WUF5 828 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 GPRASP2Q96D09 838 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 PKD2L1Q9P0L9 805 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 UBIAD1Q9Y5Z9 338 aa22.76■■□□□ 1.23
TSPAN3-210ENST00000561277 STK36Q9NRP7 1315 aa22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 KPNA6O60684 536 aa22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 DGKDQ16760 1214 aa22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 CYFIP1Q7L576 1253 aa22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 ORC3Q9UBD5 711 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 LIMCH1Q9UPQ0 1083 aa22.75■■□□□ 1.23
TSPAN3-210ENST00000561277 DOCK5Q9H7D0 1870 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 ZNF286BP0CG31 522 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 ARHGAP4P98171 946 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 MDM2Q00987 491 aaPredicted RBP22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 SP4Q02446 784 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 FAAP100Q0VG06 881 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 NEDD9Q14511 834 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 CYP2W1Q8TAV3 490 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 CDHR1Q96JP9 859 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 TOX2Q96NM4 488 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 JADE2Q9NQC1 790 aa22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 COLQQ9Y215 455 aaPredicted RBP22.74■■□□□ 1.23
TSPAN3-210ENST00000561277 TRIM43BA6NCK2 446 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 ZNF76P36508 570 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 MAGEA10P43363 369 aaPredicted RBP22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 RABEP1Q15276 862 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 FAM47CQ5HY64 1035 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 MCTP2Q6DN12 878 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 FAM126BQ8IXS8 530 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 SLC43A3Q8NBI5 491 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 TRIM43Q96BQ3 446 aaPredicted RBP22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 MXRA8Q9BRK3 442 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 TMEM39AQ9NV64 488 aa22.73■■□□□ 1.23
TSPAN3-210ENST00000561277 NOP56O00567 594 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 ATP9AO75110 1047 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 NBPF20Q3BBV1 942 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 METTL7BQ6UX53 244 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 NSUN7Q8NE18 718 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 GJB4Q9NTQ9 266 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 PCDHA4Q9UN74 947 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 KCNJ14Q9UNX9 436 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 SCN10AQ9Y5Y9 1956 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 TLR3O15455 904 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 JAK2O60674 1132 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 KCNA2P16389 499 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 CEP55Q53EZ4 464 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 CCDC83Q8IWF9 413 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 TBC1D32Q96NH3 1257 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 LBHD1Q9BQE6 289 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 SENP7Q9BQF6 1050 aa22.72■■□□□ 1.23
TSPAN3-210ENST00000561277 LTBP2Q14767 1821 aa22.71■■□□□ 1.23
TSPAN3-210ENST00000561277 BLIDQ8IZY5 108 aa22.71■■□□□ 1.23
TSPAN3-210ENST00000561277 WASF1Q92558 559 aa22.71■■□□□ 1.23
TSPAN3-210ENST00000561277 ALG1Q9BT22 464 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms