RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 XRRA1Q6P2D8 792 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 NEK8Q86SG6 692 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
TPM1-219ENST00000559397 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
TPM1-219ENST00000559397 FUCA2Q9BTY2 467 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 GRPEL1Q9HAV7 217 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 FBXO2Q9UK22 296 aaPredicted RBP18.74■□□□□ 0.59
TPM1-219ENST00000559397 HTTP42858 3142 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 ASB14A6NK59 587 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 MYCLP12524 364 aaPredicted RBP18.73■□□□□ 0.59
TPM1-219ENST00000559397 CCND2P30279 289 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 CIITAP33076 1130 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 CCL14Q16627 93 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 OLFML2BQ68BL8 750 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 SHC4Q6S5L8 630 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
TPM1-219ENST00000559397 CYP3A7-CYP3A51PA0A087WV96 503 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 A0A1B0GVL5 298 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 B4DLN1 442 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 ATP2B1P20020 1258 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 CYP3A7P24462 503 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 NDUFA8P51970 172 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 LBX1P52954 281 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 PRMT2P55345 433 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 LETM2Q2VYF4 491 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 RESP18Q5W5W9 173 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 ARMCX2Q7L311 632 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 ZNF579Q8NAF0 562 aaKnown RBP18.73■□□□□ 0.59
TPM1-219ENST00000559397 ZFP91Q96JP5 570 aaPredicted RBP18.73■□□□□ 0.59
TPM1-219ENST00000559397 MBOAT7Q96N66 472 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
TPM1-219ENST00000559397 HPSEQ9Y251 543 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
TPM1-219ENST00000559397 SYNGAP1Q96PV0 1343 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 FAM86B1E9PN63 330 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 FAM86B2P0C5J1 330 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 PDE4DQ08499 809 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 STXBP2Q15833 593 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 MOXD1Q6UVY6 613 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 CYP2W1Q8TAV3 490 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 TSPY26PQ9H489 355 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 UBIAD1Q9Y5Z9 338 aa18.72■□□□□ 0.59
TPM1-219ENST00000559397 CTAGE5O15320 804 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 EIF3JO75822 258 aaKnown RBP18.71■□□□□ 0.59
TPM1-219ENST00000559397 STAM2O75886 525 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 TDP2O95551 362 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 SNAI1O95863 264 aaPredicted RBP18.71■□□□□ 0.59
TPM1-219ENST00000559397 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
TPM1-219ENST00000559397 CLIC6Q96NY7 704 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 KATNBL1Q9H079 304 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.71■□□□□ 0.59
TPM1-219ENST00000559397 CENPFP49454 3210 aa18.71■□□□□ 0.59
TPM1-219ENST00000559397 IGLV3-22A0A075B6J6 115 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 CCNT1O60563 726 aaKnown RBP18.7■□□□□ 0.58
TPM1-219ENST00000559397 KINO60870 393 aaKnown RBP18.7■□□□□ 0.58
TPM1-219ENST00000559397 RGS20O76081 388 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 PFKFB1P16118 471 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 ITGB5P18084 799 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
TPM1-219ENST00000559397 ZNF174Q15697 407 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 CAMK4Q16566 473 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 TRIB2Q92519 343 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 MXRA8Q9BRK3 442 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 KIAA1217Q5T5P2 1943 aa18.7■□□□□ 0.58
TPM1-219ENST00000559397 MEIS1O00470 390 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 ZNF76P36508 570 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 RAET1EQ8TD07 263 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 LENG9Q96B70 501 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 INPP4AQ96PE3 977 aaPredicted RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 NAP1L4Q99733 375 aaKnown RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 SLC37A4O43826 429 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 GCFC2P16383 781 aaKnown RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 CYP2C19P33261 490 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 GRIN1Q05586 938 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 Q4G0T1 1027 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 NIPA1Q7RTP0 329 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 FBXO16Q8IX29 292 aaPredicted RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 TRMT44Q8IYL2 757 aaKnown RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 PXYLP1Q8TE99 480 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 TIGD1Q96MW7 591 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 DDX25Q9UHL0 483 aaKnown RBP18.69■□□□□ 0.58
TPM1-219ENST00000559397 MRVI1Q9Y6F6 885 aa18.69■□□□□ 0.58
TPM1-219ENST00000559397 ADCY3O60266 1144 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 ZNF202O95125 648 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 PTGDRQ13258 359 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 ORC2Q13416 577 aaPredicted RBP18.68■□□□□ 0.58
TPM1-219ENST00000559397 PRR16Q569H4 304 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 EEPD1Q7L9B9 569 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 VTA1Q9NP79 307 aa18.68■□□□□ 0.58
TPM1-219ENST00000559397 PTPN22Q9Y2R2 807 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms