RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GJC2Q5T442 439 aaPredicted RBP24.67■■□□□ 1.54
SNX1-206ENST00000559389 MOXD1Q6UVY6 613 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 TLK2Q86UE8 772 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 NOSTRINQ8IVI9 506 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 CYP2W1Q8TAV3 490 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 CDHR1Q96JP9 859 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 UPF3AQ9H1J1 476 aaKnown RBP24.67■■□□□ 1.54
SNX1-206ENST00000559389 XPNPEP3Q9NQH7 507 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 DDX41Q9UJV9 622 aaKnown RBP24.67■■□□□ 1.54
SNX1-206ENST00000559389 OGDHLQ9ULD0 1010 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 MEIS1O00470 390 aa24.66■■□□□ 1.54
SNX1-206ENST00000559389 SETQ01105 290 aaPredicted RBP24.66■■□□□ 1.54
SNX1-206ENST00000559389 GNL2Q13823 731 aaKnown RBP24.66■■□□□ 1.54
SNX1-206ENST00000559389 MBOAT7Q96N66 472 aa24.66■■□□□ 1.54
SNX1-206ENST00000559389 Q9Y3F1 56 aa24.66■■□□□ 1.54
SNX1-206ENST00000559389 POTEFA5A3E0 1075 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 ADAMTS4O75173 837 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 TDP2O95551 362 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 LY6KQ17RY6 165 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 SPRYD3Q8NCJ5 442 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 COPS5Q92905 334 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 LENG9Q96B70 501 aa24.65■■□□□ 1.54
SNX1-206ENST00000559389 CYP3A7-CYP3A51PA0A087WV96 503 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 VPS37CA5D8V6 355 aaPredicted RBP24.64■■□□□ 1.54
SNX1-206ENST00000559389 MAFGO15525 162 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 GCFC2P16383 781 aaKnown RBP24.64■■□□□ 1.54
SNX1-206ENST00000559389 CYP3A7P24462 503 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 GJA9P57773 515 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 NKX3-2P78367 333 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 SP2Q02086 613 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 LETM2Q2VYF4 491 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 MCTP1Q6DN14 999 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 PLA2G4DQ86XP0 818 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 KCNH7Q9NS40 1196 aa24.64■■□□□ 1.54
SNX1-206ENST00000559389 PGK1P00558 417 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 GH1P01241 217 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 ARP10275 920 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 KCNA2P16389 499 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 CAPN2P17655 700 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 ARHGAP1Q07960 439 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 PRR16Q569H4 304 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 PPP4R3AQ6IN85 833 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 OR6J1Q8NGC5 347 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 NAP1L4Q99733 375 aaKnown RBP24.63■■□□□ 1.53
SNX1-206ENST00000559389 SENP7Q9BQF6 1050 aa24.63■■□□□ 1.53
SNX1-206ENST00000559389 AGO4Q9HCK5 861 aaKnown RBP24.63■■□□□ 1.53
SNX1-206ENST00000559389 MYADML2A6NDP7 307 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 CCDC85CA6NKD9 419 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 WNT7AO00755 349 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 CTAGE5O15320 804 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 GGPS1O95749 300 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 CST5P28325 142 aaPredicted RBP24.62■■□□□ 1.53
SNX1-206ENST00000559389 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
SNX1-206ENST00000559389 Q4G0T1 1027 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 EMID1Q96A84 441 aaPredicted RBP24.62■■□□□ 1.53
SNX1-206ENST00000559389 AP5M1Q9H0R1 490 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 MTMR6Q9Y217 621 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 DOCK5Q9H7D0 1870 aa24.62■■□□□ 1.53
SNX1-206ENST00000559389 DYNC1LI2O43237 492 aaPredicted RBP24.61■■□□□ 1.53
SNX1-206ENST00000559389 STX6O43752 255 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 ATP9AO75110 1047 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 IRX5P78411 483 aaPredicted RBP24.61■■□□□ 1.53
SNX1-206ENST00000559389 NEDD9Q14511 834 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 CELF3Q5SZQ8 465 aaKnown RBP24.61■■□□□ 1.53
SNX1-206ENST00000559389 KLHDC9Q8NEP7 349 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 SPC25Q9HBM1 224 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 PKD2L1Q9P0L9 805 aa24.61■■□□□ 1.53
SNX1-206ENST00000559389 DDX25Q9UHL0 483 aaKnown RBP24.61■■□□□ 1.53
SNX1-206ENST00000559389 SLC37A4O43826 429 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 CCNT1O60563 726 aaKnown RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 FARP2O94887 1054 aaPredicted RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 TFRCP02786 760 aaKnown RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 C6orf222P0C671 652 aaPredicted RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 TRAPPC10P48553 1259 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 SOX10P56693 466 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 LRRC41Q15345 812 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 GIMAP8Q8ND71 665 aaPredicted RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 TSHZ2Q9NRE2 1034 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 NOL7Q9UMY1 257 aaKnown RBP24.6■■□□□ 1.53
SNX1-206ENST00000559389 NFASCO94856 1347 aa24.6■■□□□ 1.53
SNX1-206ENST00000559389 DNM1LO00429 736 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 RESTQ13127 1097 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 ITGB3BPQ13352 177 aaPredicted RBP24.59■■□□□ 1.53
SNX1-206ENST00000559389 LAMC2Q13753 1193 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 MYSM1Q5VVJ2 828 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 METTL7BQ6UX53 244 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 RNF180Q86T96 592 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 DHX37Q8IY37 1157 aaKnown RBP24.59■■□□□ 1.53
SNX1-206ENST00000559389 ANKLE1Q8NAG6 615 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 ARRDC4Q8NCT1 418 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 CENPFP49454 3210 aa24.59■■□□□ 1.53
SNX1-206ENST00000559389 IPO5O00410 1097 aaKnown RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 PDIA4P13667 645 aaKnown RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 EN2P19622 333 aaPredicted RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 MNX1P50219 401 aaPredicted RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 FSCN1Q16658 493 aaKnown RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 CCSAPQ6IQ19 270 aaPredicted RBP24.58■■□□□ 1.53
SNX1-206ENST00000559389 BRAPQ7Z569 592 aa24.58■■□□□ 1.53
SNX1-206ENST00000559389 PPTC7Q8NI37 304 aa24.58■■□□□ 1.53
SNX1-206ENST00000559389 ETNPPLQ8TBG4 499 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms