RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 MRVI1Q9Y6F6 885 aa26.06■■□□□ 1.76
PABPN1-207ENST00000556821 CD4P01730 458 aa26.05■■□□□ 1.76
PABPN1-207ENST00000556821 AFG1LQ8WV93 481 aa26.05■■□□□ 1.76
PABPN1-207ENST00000556821 CUL5Q93034 780 aa26.05■■□□□ 1.76
PABPN1-207ENST00000556821 PSTPIP2Q9H939 334 aa26.05■■□□□ 1.76
PABPN1-207ENST00000556821 TMEM39AQ9NV64 488 aa26.05■■□□□ 1.76
PABPN1-207ENST00000556821 V9GY48 417 aaPredicted RBP26.05■■□□□ 1.76
PABPN1-207ENST00000556821 MMP3P08254 477 aa26.04■■□□□ 1.76
PABPN1-207ENST00000556821 UBE2SQ16763 222 aa26.04■■□□□ 1.76
PABPN1-207ENST00000556821 ATXN2LQ8WWM7 1075 aaKnown RBP26.04■■□□□ 1.76
PABPN1-207ENST00000556821 EMID1Q96A84 441 aaPredicted RBP26.04■■□□□ 1.76
PABPN1-207ENST00000556821 MTG1Q9BT17 334 aaPredicted RBP26.04■■□□□ 1.76
PABPN1-207ENST00000556821 UPF3BQ9BZI7 483 aaKnown RBP26.04■■□□□ 1.76
PABPN1-207ENST00000556821 GBF1Q92538 1859 aa26.04■■□□□ 1.76
PABPN1-207ENST00000556821 BRDTQ58F21 947 aaPredicted RBP26.03■■□□□ 1.76
PABPN1-207ENST00000556821 RNPC3Q96LT9 517 aaKnown RBP26.03■■□□□ 1.76
PABPN1-207ENST00000556821 INPP4AQ96PE3 977 aaPredicted RBP26.03■■□□□ 1.76
PABPN1-207ENST00000556821 CYP46A1Q9Y6A2 500 aa26.03■■□□□ 1.76
PABPN1-207ENST00000556821 STXBP3O00186 592 aa26.02■■□□□ 1.76
PABPN1-207ENST00000556821 RAG1P15918 1043 aa26.02■■□□□ 1.76
PABPN1-207ENST00000556821 UBA1P22314 1058 aaKnown RBP26.02■■□□□ 1.76
PABPN1-207ENST00000556821 SP2Q02086 613 aa26.02■■□□□ 1.76
PABPN1-207ENST00000556821 PCNX4Q63HM2 1172 aa26.02■■□□□ 1.76
PABPN1-207ENST00000556821 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.01■■□□□ 1.75
PABPN1-207ENST00000556821 CCDC196A0A1B0GTZ2 297 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.01■■□□□ 1.75
PABPN1-207ENST00000556821 TLR3O15455 904 aaKnown RBP26.01■■□□□ 1.75
PABPN1-207ENST00000556821 B4GALT4O60513 344 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 KPNA6O60684 536 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 PDIA3P30101 505 aaKnown RBP26.01■■□□□ 1.75
PABPN1-207ENST00000556821 NAPAP54920 295 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 SEMA3FQ13275 785 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 NTRK3Q16288 839 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 PPP1R18Q6NYC8 613 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 KCNV1Q6PIU1 500 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 PPP1R13LQ8WUF5 828 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 SEZ6LQ9BYH1 1024 aa26.01■■□□□ 1.75
PABPN1-207ENST00000556821 hCG_1984214I3L0E3 225 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 STAM2O75886 525 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 DNAJB2P25686 324 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 ICAM3P32942 547 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 MYSM1Q5VVJ2 828 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 ZNF713Q8N859 430 aaPredicted RBP26■■□□□ 1.75
PABPN1-207ENST00000556821 ASB2Q96Q27 587 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 ZNF576Q9H609 170 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 BARHL2Q9NY43 387 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 RTEL1Q9NZ71 1219 aa26■■□□□ 1.75
PABPN1-207ENST00000556821 GGPS1O95749 300 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 TIMP1P01033 207 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 TGFB3P10600 412 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 HOXD11P31277 338 aaPredicted RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 LAMC2Q13753 1193 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 PFKFB3Q16875 520 aaPredicted RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 NBPF20Q3BBV1 942 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 CELF3Q5SZQ8 465 aaKnown RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 DHX37Q8IY37 1157 aaKnown RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 FAM122AQ96E09 287 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 TRPV6Q9H1D0 765 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 ALDH8A1Q9H2A2 487 aaPredicted RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 BCAS3Q9H6U6 928 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 NCOA5Q9HCD5 579 aaKnown RBP25.99■■□□□ 1.75
PABPN1-207ENST00000556821 RIC8AQ9NPQ8 531 aa25.99■■□□□ 1.75
PABPN1-207ENST00000556821 SORBS3O60504 671 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 HOXD8P13378 290 aaPredicted RBP25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PKN1Q16512 942 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 GNPTABQ3T906 1256 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 XRRA1Q6P2D8 792 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 TET1Q8NFU7 2136 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PPTC7Q8NI37 304 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 KAT2BQ92831 832 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PHKBQ93100 1093 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PPP1R12CQ9BZL4 782 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PCDHA6Q9UN73 950 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 PCDHA8Q9Y5H6 950 aa25.98■■□□□ 1.75
PABPN1-207ENST00000556821 SPATA31C2B4DYI2 1134 aa25.97■■□□□ 1.75
PABPN1-207ENST00000556821 SCG2P13521 617 aa25.97■■□□□ 1.75
PABPN1-207ENST00000556821 CCT2P78371 535 aaKnown RBP25.97■■□□□ 1.75
PABPN1-207ENST00000556821 HSDL1Q3SXM5 330 aa25.97■■□□□ 1.75
PABPN1-207ENST00000556821 LARP6Q9BRS8 491 aaKnown RBP25.97■■□□□ 1.75
PABPN1-207ENST00000556821 TRMT13Q9NUP7 481 aaKnown RBP25.97■■□□□ 1.75
PABPN1-207ENST00000556821 UMODL1Q5DID0 1318 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 SPDYE3A6NKU9 549 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 PRPF3O43395 683 aaKnown RBP25.96■■□□□ 1.75
PABPN1-207ENST00000556821 FIBPO43427 364 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 PPFIA3O75145 1194 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 SEC24BO95487 1268 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 ADCY7P51828 1080 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 ANAPC15P60006 121 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 FPGSQ05932 587 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 DGKDQ16760 1214 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 NFRKBQ6P4R8 1299 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 IL17RAQ96F46 866 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 PDRG1Q9NUG6 133 aa25.96■■□□□ 1.75
PABPN1-207ENST00000556821 MYH9P35579 1960 aaKnown RBP25.95■■□□□ 1.75
PABPN1-207ENST00000556821 SMCO2A6NFE2 343 aa25.95■■□□□ 1.74
PABPN1-207ENST00000556821 ZNF286BP0CG31 522 aa25.95■■□□□ 1.74
PABPN1-207ENST00000556821 IFNAR1P17181 557 aa25.95■■□□□ 1.74
PABPN1-207ENST00000556821 CLK2P49760 499 aaKnown RBP25.95■■□□□ 1.74
PABPN1-207ENST00000556821 FAM47CQ5HY64 1035 aa25.95■■□□□ 1.74
PABPN1-207ENST00000556821 MFSD5Q6N075 450 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 492.4 ms