RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 TANC1Q9C0D5 1861 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 MYH7BA7E2Y1 1941 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 B4DLN1 442 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 HIP1O00291 1037 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 ZBTB5O15062 677 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 F2P00734 622 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 CXCL10P02778 98 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 ACTN1P12814 892 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 HOXD8P13378 290 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 SELPP16109 830 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 MRPL12P52815 198 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 ANTXR2P58335 489 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 RBL2Q08999 1139 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 GRB10Q13322 594 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 MFSD10Q14728 455 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 GRM4Q14833 912 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 PGM5Q15124 567 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 DGKDQ16760 1214 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 KIAA0753Q2KHM9 967 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 ZNF618Q5T7W0 954 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 PHOSPHO2Q8TCD6 241 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 AFAP1L1Q8TED9 768 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 C16orf70Q9BSU1 422 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
HNRNPC-218ENST00000555215 MYO7AQ13402 2215 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 GGPS1O95749 300 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 UBA1P22314 1058 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 CHMLP26374 656 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 TROAPQ12815 778 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.536e-7■■■■□ 21.4
HNRNPC-218ENST00000555215 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 MAF1Q9H063 256 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
HNRNPC-218ENST00000555215 E7EWF7 191 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 TLL1O43897 1013 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 NT5C2P49902 561 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 IRX6P78412 446 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 SKIV2LQ15477 1246 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-218ENST00000555215 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 PPFIA4O75335 1185 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 COL9A1P20849 921 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 PTK7Q13308 1070 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 CNKSR3Q6P9H4 555 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 IGDCC4Q8TDY8 1250 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.542e-7■■■□□ 17.4
HNRNPC-218ENST00000555215 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
HNRNPC-218ENST00000555215 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 GCOM1H8Y6P7 765 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 TREHO43280 583 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 GJB5O95377 273 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 HOXC8P31273 242 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 KCNJ6P48051 423 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 SERINC5Q86VE9 423 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 TRIM50Q86XT4 487 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
HNRNPC-218ENST00000555215 KIF28PB7ZC32 967 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 SGSM2O43147 1006 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 LGALS2P05162 132 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 SMIM10L2AP0DMW4 78 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 SMIM10L2BP0DMW5 78 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 CCND2P30279 289 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 THPOP40225 353 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 CD320Q9NPF0 282 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 SETD4Q9NVD3 440 aa11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-218ENST00000555215 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms