RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MPZL3Q6UWV2 235 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 TSPYL5Q86VY4 417 aaPredicted RBP5.47□□□□□ -1.53
VTI1B-203ENST00000554636 EAF1Q96JC9 268 aaPredicted RBP5.47□□□□□ -1.53
VTI1B-203ENST00000554636 ASPNQ9BXN1 380 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 ADAMTS10Q9H324 1103 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.47□□□□□ -1.53
VTI1B-203ENST00000554636 NARFQ9UHQ1 456 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 TMEM59LQ9UK28 342 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 PCDHA11Q9Y5I1 949 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 DLEC1Q9Y238 1755 aa5.47□□□□□ -1.53
VTI1B-203ENST00000554636 ARFGEF1Q9Y6D6 1849 aa5.46□□□□□ -1.53
VTI1B-203ENST00000554636 ADCY9O60503 1353 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 ANKRD31Q8N7Z5 1873 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 PRAMEF22A3QJZ6 481 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 LRRC10BA6NIK2 292 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 RGS13O14921 159 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 STARD3NLO95772 234 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 CANXP27824 592 aaKnown RBP5.46□□□□□ -1.54
VTI1B-203ENST00000554636 TM4SF1P30408 202 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 TRHRP34981 398 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-203ENST00000554636 GDNFP39905 211 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 ZNF165P49910 485 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 NFIXQ14938 502 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 KRTAP1-3Q8IUG1 177 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
VTI1B-203ENST00000554636 THUMPD2Q9BTF0 503 aaKnown RBP5.46□□□□□ -1.54
VTI1B-203ENST00000554636 GPR62Q9BZJ7 368 aa5.46□□□□□ -1.54
VTI1B-203ENST00000554636 PRKRIP1Q9H875 184 aaPredicted RBP5.46□□□□□ -1.54
VTI1B-203ENST00000554636 COL11A2P13942 1736 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 CARMIL3Q8ND23 1372 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 A0A087WZG4 1122 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ZNF503-AS2A6NEH8 195 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ATE1O95260 518 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 RECKO95980 971 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 A1BGP04217 495 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 C8AP07357 584 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 DPEP1P16444 411 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ZEB1P37275 1124 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 IL6STP40189 918 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 TGFB2P61812 414 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 SNW1Q13573 536 aaKnown RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ZNF124Q15973 351 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 GAB4Q2WGN9 574 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 TMEM67Q5HYA8 995 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 FBXW10Q5XX13 1052 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 NLRC3Q7RTR2 1065 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 TMEM40Q8WWA1 233 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 RNF34Q969K3 372 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ATG4CQ96DT6 458 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 NT5C1AQ9BXI3 368 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 TEX13AQ9BXU3 409 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 ASCC2Q9H1I8 757 aaPredicted RBP5.45□□□□□ -1.54
VTI1B-203ENST00000554636 EHMT1Q9H9B1 1298 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 MIS18AQ9NYP9 233 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 USP16Q9Y5T5 823 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 MAPK8IP3Q9UPT6 1336 aa5.45□□□□□ -1.54
VTI1B-203ENST00000554636 A0A0G2JLW4 131 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 MEIS1O00470 390 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 CLEC3AO75596 197 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 CAMTA2O94983 1202 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 GLI1P08151 1106 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 SNRPA1P09661 255 aaKnown RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 SRFP11831 508 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 RAC2P15153 192 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 KCNA3P22001 575 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 TMPOP42166 694 aaKnown RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 PIP4K2AP48426 406 aaPredicted RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 RNF4P78317 190 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 NMIQ13287 307 aaPredicted RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 TAF7Q15545 349 aaPredicted RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 TBC1D9BQ66K14 1250 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 PRR23BQ6ZRT6 265 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 TMC3Q7Z5M5 1100 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 POU5F2Q8N7G0 328 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 ABHD4Q8TB40 342 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 PNISRQ8TF01 805 aaKnown RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 FERD3LQ96RJ6 166 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 DIRC2Q96SL1 478 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 MKRN2Q9H000 416 aaKnown RBP5.44□□□□□ -1.54
VTI1B-203ENST00000554636 ATP10DQ9P241 1426 aa5.44□□□□□ -1.54
VTI1B-203ENST00000554636 FKTNO75072 461 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 SERPINB2P05120 415 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 CHRNA5P30532 468 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 EIF4A1P60842 406 aaKnown RBP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 RACK1P63244 317 aaKnown RBP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 C9orf131Q5VYM1 1079 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 KSR1Q8IVT5 923 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 SLITRK4Q8IW52 837 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 CCDC146Q8IYE0 955 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 REXO1Q8N1G1 1221 aaKnown RBP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 MYLIPQ8WY64 445 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 CCDC120Q96HB5 630 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 SLC6A18Q96N87 628 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 PNNQ9H307 717 aaKnown RBP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 CNNM2Q9H8M5 875 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 KCNK12Q9HB15 430 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 METTL5Q9NRN9 209 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms