RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 POTEGQ6S5H5 508 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 CATSPER3Q86XQ3 398 aa22.07■■□□□ 1.12
SSH1-209ENST00000551165 TAF1DQ9H5J8 278 aaPredicted RBP22.07■■□□□ 1.12
SSH1-209ENST00000551165 MEIS1O00470 390 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 SPATA31C1P0DKV0 1188 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 ITGB5P18084 799 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 PSMC6P62333 389 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 LRMPQ12912 555 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 STK4Q13043 487 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 NSMFQ6X4W1 530 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 FILIP1Q7Z7B0 1213 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 INTS13Q9NVM9 706 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 CSADQ9Y600 493 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 PMS1P54277 932 aaKnown RBP22.06■■□□□ 1.12
SSH1-209ENST00000551165 GHRHRQ02643 423 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 PDE4DQ08499 809 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 SH3D19Q5HYK7 790 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 SPATA1Q5VX52 437 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 SNRNP48Q6IEG0 339 aaKnown RBP22.06■■□□□ 1.12
SSH1-209ENST00000551165 MCF2L2Q86YR7 1114 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 TEX2Q8IWB9 1127 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 GIMAP8Q8ND71 665 aaPredicted RBP22.06■■□□□ 1.12
SSH1-209ENST00000551165 NELFBQ8WX92 580 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 RNF146Q9NTX7 359 aa22.06■■□□□ 1.12
SSH1-209ENST00000551165 TRIM49BA6NDI0 452 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 IRF6O14896 467 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 UBASH3AP57075 661 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 ADSSL1Q8N142 457 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 OTUD5Q96G74 571 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 PTPRFP10586 1907 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 SPDYE16A6NNV3 312 aaPredicted RBP22.05■■□□□ 1.12
SSH1-209ENST00000551165 SSBP05455 408 aaKnown RBP eCLIP22.05■■□□□ 1.12
SSH1-209ENST00000551165 EIF2AK2P19525 551 aaKnown RBP22.05■■□□□ 1.12
SSH1-209ENST00000551165 MSNP26038 577 aaKnown RBP22.05■■□□□ 1.12
SSH1-209ENST00000551165 AMPD3Q01432 767 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 CYP4A11Q02928 519 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 OTOP1Q7RTM1 612 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 C17orf53Q8N3J3 647 aaPredicted RBP22.05■■□□□ 1.12
SSH1-209ENST00000551165 DDX12PQ92771 950 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 RGL1Q9NZL6 768 aa22.05■■□□□ 1.12
SSH1-209ENST00000551165 GOLGA6L6A8MZA4 724 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 CHMP2AO43633 222 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 PSMD10O75832 226 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 MRPS9P82933 396 aaKnown RBP22.04■■□□□ 1.12
SSH1-209ENST00000551165 TTLL12Q14166 644 aaPredicted RBP22.04■■□□□ 1.12
SSH1-209ENST00000551165 SLC5A5Q92911 643 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 WDR11Q9BZH6 1224 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 PKD2L1Q9P0L9 805 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 NPHP3-ACAD11A0A0J9YXS1 232 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 IREB2P48200 963 aaKnown RBP22.04■■□□□ 1.12
SSH1-209ENST00000551165 PAK1Q13153 545 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 CT47A1Q5JQC4 288 aaPredicted RBP22.04■■□□□ 1.12
SSH1-209ENST00000551165 LRCH2Q5VUJ6 765 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 RNF207Q6ZRF8 634 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 ZC3H15Q8WU90 426 aaKnown RBP22.04■■□□□ 1.12
SSH1-209ENST00000551165 MXRA8Q9BRK3 442 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 EHMT1Q9H9B1 1298 aa22.04■■□□□ 1.12
SSH1-209ENST00000551165 KDM3AQ9Y4C1 1321 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 CDK11BP21127 795 aaKnown RBP22.03■■□□□ 1.12
SSH1-209ENST00000551165 BAATQ14032 418 aaPredicted RBP22.03■■□□□ 1.12
SSH1-209ENST00000551165 KIAA0895Q8NCT3 520 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 CACTINQ8WUQ7 758 aaKnown RBP22.03■■□□□ 1.12
SSH1-209ENST00000551165 EXOC1Q9NV70 894 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 RWDD2AQ9UIY3 292 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 PYCARDQ9ULZ3 195 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 PLA2G4BP0C869 781 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
SSH1-209ENST00000551165 TMC6Q7Z403 805 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 ZNF577Q9BSK1 485 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 NT5C3AQ9H0P0 336 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 SLC39A2Q9NP94 309 aa22.03■■□□□ 1.12
SSH1-209ENST00000551165 FDX1P10109 184 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 RPA1P27694 616 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 PLS1Q14651 629 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 CDKAL1Q5VV42 579 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 APTXQ7Z2E3 356 aaKnown RBP22.02■■□□□ 1.12
SSH1-209ENST00000551165 GLIS3Q8NEA6 775 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 RBM46Q8TBY0 533 aaKnown RBP22.02■■□□□ 1.12
SSH1-209ENST00000551165 DNAJC19Q96DA6 116 aa22.02■■□□□ 1.12
SSH1-209ENST00000551165 EIF2AK1Q9BQI3 630 aaKnown RBP22.02■■□□□ 1.12
SSH1-209ENST00000551165 IDEP14735 1019 aa22.02■■□□□ 1.11
SSH1-209ENST00000551165 RAD51AP2Q09MP3 1159 aa22.02■■□□□ 1.11
SSH1-209ENST00000551165 RBBP6Q7Z6E9 1792 aaKnown RBP22.01■■□□□ 1.11
SSH1-209ENST00000551165 GADL1Q6ZQY3 521 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 UNC13DQ70J99 1090 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 RMDN3Q96TC7 470 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 KCNH7Q9NS40 1196 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 DDX39AO00148 427 aaKnown RBP22.01■■□□□ 1.11
SSH1-209ENST00000551165 PABPC4Q13310 644 aaKnown RBP eCLIP22.01■■□□□ 1.11
SSH1-209ENST00000551165 CTTNQ14247 550 aaKnown RBP22.01■■□□□ 1.11
SSH1-209ENST00000551165 PGM5Q15124 567 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 ARSHQ5FYA8 562 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 HAUS3Q68CZ6 603 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 ANKRD13AQ8IZ07 590 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 EEF2KMTQ96G04 330 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 UNC45AQ9H3U1 944 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 HOXC10Q9NYD6 342 aa22.01■■□□□ 1.11
SSH1-209ENST00000551165 IPO5O00410 1097 aaKnown RBP22■■□□□ 1.11
SSH1-209ENST00000551165 TRAF5O00463 557 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms