RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MYSM1Q5VVJ2 828 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 TRAF7Q6Q0C0 670 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 OSBPL7Q9BZF2 842 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 RIOX1Q9H6W3 641 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 GTF2IRD1Q9UHL9 959 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 NOD1Q9Y239 953 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 MTCH2Q9Y6C9 303 aa13.44□□□□□ -0.26
PRPF40B-212ENST00000551111 ACTN1P12814 892 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 RFC2P35250 354 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 MFSD10Q14728 455 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 PGM5Q15124 567 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 DGKDQ16760 1214 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 KIAA0753Q2KHM9 967 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 VSIG10LQ86VR7 867 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 DHX37Q8IY37 1157 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 EMID1Q96A84 441 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 ATG2AQ2TAZ0 1938 aa13.43□□□□□ -0.26
PRPF40B-212ENST00000551111 NLRC5Q86WI3 1866 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 E7EWF7 191 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 IFIT3O14879 490 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 LPXNO60711 386 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 F2P00734 622 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 SELPP16109 830 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 NT5C2P49902 561 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 KCNQ1P51787 676 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 TROAPQ12815 778 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 LAMC2Q13753 1193 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 CELF3Q5SZQ8 465 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 ZNF618Q5T7W0 954 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 LRRC8DQ7L1W4 858 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 PPTC7Q8NI37 304 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 ADAMTS19Q8TE59 1207 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 AFAP1L1Q8TED9 768 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 SLC9A7Q96T83 725 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 MAF1Q9H063 256 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 RAPGEFL1Q9UHV5 662 aa13.42□□□□□ -0.26
PRPF40B-212ENST00000551111 TNFRSF10AO00220 468 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 GGPS1O95749 300 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 CXCL10P02778 98 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 BMP1P13497 986 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 UBA1P22314 1058 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 MRPS5P82675 430 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 RBL2Q08999 1139 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 SEMA3FQ13275 785 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 C7orf31Q8N865 590 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 CAGE1Q8TC20 777 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 PHOSPHO2Q8TCD6 241 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 IGDCC4Q8TDY8 1250 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 SPATA33Q96N06 139 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
PRPF40B-212ENST00000551111 SGSM2O43147 1006 aa13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 TLL1O43897 1013 aa13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 POU3F3P20264 500 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 GRB10Q13322 594 aa13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 MB21D2Q8IYB1 491 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
PRPF40B-212ENST00000551111 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 GCOM1H8Y6P7 765 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 PPFIA4O75335 1185 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 TRDNQ13061 729 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 PTK7Q13308 1070 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 WTAPQ15007 396 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 CNKSR3Q6P9H4 555 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 MTUS1Q9ULD2 1270 aa13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-212ENST00000551111 CCND2P30279 289 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 USP17L6PQ6QN14 398 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 TRIM50Q86XT4 487 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 NCOA7Q8NI08 942 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 GDPD5Q8WTR4 605 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 MAP4K1Q92918 833 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 RNPEPQ9H4A4 650 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-212ENST00000551111 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 TREHO43280 583 aa13.37□□□□□ -0.27
PRPF40B-212ENST00000551111 GJB5O95377 273 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms