RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PRPF6O94906 941 aaKnown RBP15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 COASYQ13057 564 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 KCNB1Q14721 858 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 BRD3Q15059 726 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 CERKLQ49MI3 558 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 GALNT17Q6IS24 598 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 LEKR1Q6ZMV7 388 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 GJD4Q96KN9 370 aaPredicted RBP15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 PCDHA13Q9Y5I0 950 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 TCP10L2B9ZVM9 353 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 CCDC70Q6NSX1 233 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 TBC1D5Q92609 795 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 AK8Q96MA6 479 aa15.13■□□□□ 0.01
PRPF40B-209ENST00000548825 ZNF263O14978 683 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 PSMC6P62333 389 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 ADAM9Q13443 819 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 LLGL1Q15334 1064 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 MIIPQ5JXC2 388 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 RAD54LQ92698 747 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 MMP10P09238 476 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 MYBL2P10244 700 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 EHHADHQ08426 723 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 SF3A3Q12874 501 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 ZSCAN26Q16670 478 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 ADAT2Q7Z6V5 191 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 C10orf67Q8IYJ2 551 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 RGL1Q9NZL6 768 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 AFF2P51816 1311 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 SPDYE3A6NKU9 549 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 BBOX1O75936 387 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 PLA2G4BP0C869 781 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 CDC37Q16543 378 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 FAM204AQ9H8W3 233 aa15.12■□□□□ 0.01
PRPF40B-209ENST00000548825 PNMA6FA0A0J9YX94 578 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 LAD1O00515 517 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 ICA1Q05084 483 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 KCTD16Q68DU8 428 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 TPH2Q8IWU9 490 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 HYOU1Q9Y4L1 999 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 RSPH10B2B2RC85 870 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 ZBTB39O15060 712 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 RSPH10BP0C881 870 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 MIGA2Q7L4E1 593 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 C7orf25Q9BPX7 421 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 LRRC1Q9BTT6 524 aa15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-209ENST00000548825 GCNT3O95395 438 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 NR2F2P24468 414 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 CHRNA5P30532 468 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 ASPRV1Q53RT3 343 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 RUFY1Q96T51 708 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 QTRT2Q9H974 415 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 ANKRD36CQ5JPF3 1778 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 ZSCAN5CA6NGD5 496 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 ZBTB5O15062 677 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 PAFAH1B1P43034 410 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 CTTNQ14247 550 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 KIAA0753Q2KHM9 967 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 NUP58Q9BVL2 599 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 PACSIN1Q9BY11 444 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 FAM107BQ9H098 131 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 BHMT2Q9H2M3 363 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 DMGDHQ9UI17 866 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 COL14A1Q05707 1796 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 GH2P01242 217 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 CYP2C19P33261 490 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 PRPHP41219 470 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 CRKP46108 304 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 KLHL30Q0D2K2 578 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 ANO3Q9BYT9 981 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 MYH10P35580 1976 aa15.1■□□□□ 0.01
PRPF40B-209ENST00000548825 SHMT1P34896 483 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 CASP5P51878 434 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 VAV2P52735 878 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 FOXR1Q6PIV2 292 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 CCDC65Q8IXS2 484 aa15.09■□□□□ 0.01
PRPF40B-209ENST00000548825 HAS1Q92839 578 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms