RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PRR16Q569H4 304 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 XRRA1Q6P2D8 792 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
LIMS2-217ENST00000545738 EHMT1Q9H9B1 1298 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 KCNH7Q9NS40 1196 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 PCDHB6Q9Y5E3 794 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 SORBS3O60504 671 aa18.52■□□□□ 0.56
LIMS2-217ENST00000545738 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-217ENST00000545738 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
LIMS2-217ENST00000545738 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
LIMS2-217ENST00000545738 PKD2L1Q9P0L9 805 aa18.52■□□□□ 0.56
LIMS2-217ENST00000545738 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
LIMS2-217ENST00000545738 MRVI1Q9Y6F6 885 aa18.52■□□□□ 0.56
LIMS2-217ENST00000545738 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 SEPT4O43236 478 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.55
LIMS2-217ENST00000545738 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.55
LIMS2-217ENST00000545738 CNGA1P29973 690 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 ICAM3P32942 547 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 ITGB3BPQ13352 177 aaPredicted RBP18.52■□□□□ 0.55
LIMS2-217ENST00000545738 MTMR1Q13613 665 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 MYSM1Q5VVJ2 828 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 LHX8Q68G74 356 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 POTEDQ86YR6 584 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 TMEM60Q9H2L4 133 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 PAK6Q9NQU5 681 aaPredicted RBP18.52■□□□□ 0.55
LIMS2-217ENST00000545738 NRBP1Q9UHY1 535 aa18.52■□□□□ 0.55
LIMS2-217ENST00000545738 DDX41Q9UJV9 622 aaKnown RBP18.52■□□□□ 0.55
LIMS2-217ENST00000545738 B4DLN1 442 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 MSH4O15457 936 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 STAM2O75886 525 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 F13A1P00488 732 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 CCL5P13501 91 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 KCNA2P16389 499 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 PLA2G4DQ86XP0 818 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 SCFD2Q8WU76 684 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 GPRASP2Q96D09 838 aa18.51■□□□□ 0.55
LIMS2-217ENST00000545738 MPHOSPH6Q99547 160 aaKnown RBP18.51■□□□□ 0.55
LIMS2-217ENST00000545738 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.51■□□□□ 0.55
LIMS2-217ENST00000545738 ZNF76P36508 570 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 ZNF174Q15697 407 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 Q4G0T1 1027 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 MOXD1Q6UVY6 613 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 ETNPPLQ8TBG4 499 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 HAS1Q92839 578 aa18.5■□□□□ 0.55
LIMS2-217ENST00000545738 AGO4Q9HCK5 861 aaKnown RBP18.5■□□□□ 0.55
LIMS2-217ENST00000545738 HMX1Q9NP08 348 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-217ENST00000545738 DDX25Q9UHL0 483 aaKnown RBP18.5■□□□□ 0.55
LIMS2-217ENST00000545738 MYADML2A6NDP7 307 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 CTAGE5O15320 804 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
LIMS2-217ENST00000545738 FIBPO43427 364 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 TXNP10599 105 aaKnown RBP18.49■□□□□ 0.55
LIMS2-217ENST00000545738 AKR1A1P14550 325 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 MCM7P33993 719 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 TNFAIP2Q03169 654 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-217ENST00000545738 DUSP28Q4G0W2 176 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 TTC38Q5R3I4 469 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-217ENST00000545738 KCNMB3Q9NPA1 279 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 DDX20Q9UHI6 824 aaKnown RBP18.49■□□□□ 0.55
LIMS2-217ENST00000545738 ARHGAP1Q07960 439 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 GNPTABQ3T906 1256 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 NIPA1Q7RTP0 329 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 BRAPQ7Z569 592 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 C4orf32Q8N8J7 132 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 FAM184BQ9ULE4 1060 aa18.49■□□□□ 0.55
LIMS2-217ENST00000545738 TTLL4Q14679 1199 aa18.48■□□□□ 0.55
LIMS2-217ENST00000545738 IQSEC1Q6DN90 963 aa18.48■□□□□ 0.55
LIMS2-217ENST00000545738 NLRX1Q86UT6 975 aa18.48■□□□□ 0.55
LIMS2-217ENST00000545738 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.48■□□□□ 0.55
LIMS2-217ENST00000545738 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-217ENST00000545738 FARP2O94887 1054 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-217ENST00000545738 GGPS1O95749 300 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 PGK1P00558 417 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 TRAPPC10P48553 1259 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 TCHHQ07283 1943 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 TLK2Q86UE8 772 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 MTMR9Q96QG7 549 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 SYNRGQ9UMZ2 1314 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 CLIC4Q9Y696 253 aa18.47■□□□□ 0.55
LIMS2-217ENST00000545738 IPO5O00410 1097 aaKnown RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 ADAMTS4O75173 837 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 TGFB3P10600 412 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 GCFC2P16383 781 aaKnown RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 SETQ01105 290 aaPredicted RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 HSDL1Q3SXM5 330 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 RILPL1Q5EBL4 403 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 USP28Q96RU2 1077 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 ZSCAN16Q9H4T2 348 aaPredicted RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 NEMFO60524 1076 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 DUSP11O75319 330 aaKnown RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 CCNE2O96020 404 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 CELF3Q5SZQ8 465 aaKnown RBP18.46■□□□□ 0.55
LIMS2-217ENST00000545738 SLC5A5Q92911 643 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms