RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 RPS6KB1P23443 525 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 ITGB8P26012 769 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 RCAN1P53805 252 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PURAQ00577 322 aaKnown RBP11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 LRIT3Q3SXY7 679 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 USP17L6PQ6QN14 398 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FAM126BQ8IXS8 530 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 FBXL16Q8N461 479 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 NAP1L2Q9ULW6 460 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 MRVI1Q9Y6F6 885 aa11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-214ENST00000543048 CCDC196A0A1B0GTZ2 297 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MEIS2O14770 477 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 STAM2O75886 525 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RGS20O76081 388 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CASTP20810 708 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PSMC6P62333 389 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 IL31RAQ8NI17 732 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FAM217BQ9NTX9 383 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SZT2Q5T011 3432 aa11.2□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MYO9BQ13459 2157 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SUPT20HL2P0C7V6 817 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CDC27P30260 824 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FPGSQ05932 587 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FUT2Q10981 343 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SHHQ15465 462 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CELF3Q5SZQ8 465 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MFSD5Q6N075 450 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 XRRA1Q6P2D8 792 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 BRF1Q92994 677 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 AGXT2Q9BYV1 514 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TRPV6Q9H1D0 765 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SOX1O00570 391 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPFIA4O75335 1185 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPP1R37O75864 691 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MMP3P08254 477 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ICAM3P32942 547 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 METAP2P50579 478 aaKnown RBP eCLIP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MRPS9P82933 396 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SP2Q02086 613 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 DGKDQ16760 1214 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GNPTABQ3T906 1256 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TEX2Q8IWB9 1127 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 TMEM199Q8N511 208 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPTC7Q8NI37 304 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ALDH8A1Q9H2A2 487 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 MLXIPQ9HAP2 919 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RTEL1Q9NZ71 1219 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 LAMA2P24043 3122 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 B4GALT4O60513 344 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GGPS1O95749 300 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 CYP2C18P33260 490 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NAPAP54920 295 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 EVCP57679 992 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPIGQ13427 754 aaKnown RBP eCLIP11.17□□□□□ -0.628e-8■■■■□ 26.7
TNFRSF1A-214ENST00000543048 NEDD9Q14511 834 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 FAM47CQ5HY64 1035 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 C9orf50Q5SZB4 431 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 WWC2Q6AWC2 1192 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PCDHA6Q9UN73 950 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 PCDHA8Q9Y5H6 950 aa11.17□□□□□ -0.62
TNFRSF1A-214ENST00000543048 SCN5AQ14524 2016 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms